Mozzherin Dmitry Ju, McConnell Maeve, Miller Holly, Fisher Paul A
Department of Pharmacological Sciences, University Medical Center, State University of New York at Stony Brook, Stony Brook, NY 11794-8651, USA.
BMC Biochem. 2004 Aug 13;5:13. doi: 10.1186/1471-2091-5-13.
We and others have shown four distinct and presumably related effects of mammalian proliferating cell nuclear antigen (PCNA) on DNA synthesis catalyzed by mammalian DNA polymerase delta(pol delta). In the presence of homologous PCNA, pol delta exhibits 1) increased absolute activity; 2) increased processivity of DNA synthesis; 3) stable binding of synthetic oligonucleotide template-primers (t1/2 of the pol deltaPCNAtemplate-primer complex >/=2.5 h); and 4) enhanced synthesis of DNA opposite and beyond template base lesions. This last effect is potentially mutagenic in vivo. Biochemical studies performed in parallel with in vivo genetic analyses, would represent an extremely powerful approach to investigate further, both DNA replication and repair in eukaryotes.
Drosophila PCNA, although highly similar in structure to mammalian PCNA (e.g., it is >70% identical to human PCNA in amino acid sequence), can only substitute poorly for either calf thymus or human PCNA (approximately 10% as well) in affecting calf thymus pol delta. However, by mutating one or only a few amino acids in the region of Drosophila PCNA thought to interact with pol delta, all four effects can be enhanced dramatically.
Our results therefore suggest that all four above effects depend at least in part on the PCNA-pol delta interaction. Moreover unlike mammals, Drosophila offers the potential for immediate in vivo genetic analyses. Although it has proven difficult to obtain sufficient amounts of homologous pol delta for parallel in vitro biochemical studies, by altering Drosophila PCNA using site-directed mutagenesis as suggested by our results, in vitro biochemical studies may now be performed using human and/or calf thymus pol delta preparations.
我们和其他人已经证明,哺乳动物增殖细胞核抗原(PCNA)对哺乳动物DNA聚合酶δ(pol δ)催化的DNA合成有四种不同且可能相关的作用。在同源PCNA存在的情况下,pol δ表现出:1)绝对活性增加;2)DNA合成的持续合成能力增加;3)合成寡核苷酸模板引物的稳定结合(pol δ-PCNA-模板引物复合物的半衰期≥2.5小时);4)增强与模板碱基损伤相对及以外的DNA合成。最后一种作用在体内可能具有致突变性。与体内遗传分析并行进行的生化研究,将是进一步研究真核生物DNA复制和修复的极其有力的方法。
果蝇PCNA虽然在结构上与哺乳动物PCNA高度相似(例如,其氨基酸序列与人类PCNA的同源性>70%),但在影响小牛胸腺pol δ时,只能很差地替代小牛胸腺或人类PCNA(约为10%)。然而,通过突变果蝇PCNA中被认为与pol δ相互作用区域的一个或仅几个氨基酸,所有这四种作用都可以显著增强。
因此,我们的结果表明,上述所有四种作用至少部分取决于PCNA-pol δ相互作用。此外与哺乳动物不同,果蝇具有立即进行体内遗传分析的潜力。尽管已证明难以获得足够量的同源pol δ用于并行的体外生化研究,但根据我们的结果,通过定点诱变改变果蝇PCNA,现在可以使用人源和/或小牛胸腺pol δ制剂进行体外生化研究。