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甜菜的细胞质雄性不育型和正常型线粒体基因组具有相同的已知功能基因互补,但在表达的开放阅读框(ORF)含量上有所不同。

The cytoplasmic male-sterile type and normal type mitochondrial genomes of sugar beet share the same complement of genes of known function but differ in the content of expressed ORFs.

作者信息

Satoh M, Kubo T, Nishizawa S, Estiati A, Itchoda N, Mikami T

机构信息

Laboratory of Genetic Engineering, Graduate School of Agriculture, Hokkaido University, N-9 W-9, 060-8589 Kita-ku, Sapporo, Japan.

出版信息

Mol Genet Genomics. 2004 Oct;272(3):247-56. doi: 10.1007/s00438-004-1058-9. Epub 2004 Sep 1.

Abstract

The complete nucleotide sequence (501,020 bp) of the mitochondrial genome from cytoplasmic male-sterile (CMS) sugar beet was determined. This enabled us to compare the sequence with that previously published for the mitochondrial genome of normal, male-fertile sugar beet. The comparison revealed that the two genomes have the same complement of genes of known function. The rRNA and tRNA genes encoded in the CMS mitochondrial genome share 100% sequence identity with their respective counterparts in the normal genome. We found a total of 24 single nucleotide substitutions in 11 protein genes encoded by the CMS mitochondrial genome. However, none of these seems to be responsible for male sterility. In addition, several other ORFs were found to be actively transcribed in sugar beet mitochondria. Among these, Norf246 was observed to be present in the normal mitochondrial genome but absent from the CMS genome. However, it seems unlikely that the loss of Norf246 is causally related to the expression of CMS, because previous studies on mitochondrial translation products failed to detect the product of this ORF. Conversely, the CMS genome contains four transcribed ORFs (Satp6presequence, Scox2-2 , Sorf324 and Sorf119) which are missing from the normal genome. These ORFs, which are potential candidates for CMS genes, were shown to be generated by mitochondrial genome rearrangements.

摘要

测定了细胞质雄性不育(CMS)甜菜线粒体基因组的完整核苷酸序列(501,020 bp)。这使我们能够将该序列与先前发表的正常可育雄性甜菜线粒体基因组序列进行比较。比较结果显示,这两个基因组具有相同的已知功能基因组成。CMS线粒体基因组中编码的rRNA和tRNA基因与其正常基因组中的对应基因具有100%的序列同一性。我们在CMS线粒体基因组编码的11个蛋白质基因中总共发现了24个单核苷酸替换。然而,这些替换似乎都与雄性不育无关。此外,还发现甜菜线粒体中有几个其他开放阅读框(ORF)在活跃转录。其中,Norf246在正常线粒体基因组中存在,但在CMS基因组中缺失。然而,Norf246的缺失似乎不太可能与CMS的表达有因果关系,因为先前对线粒体翻译产物的研究未能检测到该ORF的产物。相反,CMS基因组包含四个转录的ORF(Satp6presequence、Scox2-2、Sorf324和Sorf119),而正常基因组中没有这些。这些ORF是CMS基因的潜在候选者,它们是由线粒体基因组重排产生的。

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