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蝇子草原生范围内线粒体与叶绿体DNA变异的比较。

Comparison between mitochondrial and chloroplast DNA variation in the native range of Silene vulgaris.

作者信息

Storchová Helena, Olson Matthew S

机构信息

Institute of Experimental Botany, Academy of Sciences of the Czech Republic, Rozvojová 135, 165 00 Prague 6, Lysolaje, Czech Republic.

出版信息

Mol Ecol. 2004 Oct;13(10):2909-19. doi: 10.1111/j.1365-294X.2004.02278.x.

Abstract

A detailed survey of mitochondrial and chloroplast diversity in eight populations of Silene vulgaris from Central Europe was conducted for comparison with previously published data on diversity from S. vulgaris populations in the introduced range. Mitochondrial DNA (mtDNA) variation around the coxI gene was assessed with Southern blotting/restriction fragment length polymorphism methods. Chloroplast variation was assessed by sequencing the intergenic spacer separating the trnH and psbA genes. Thirty mtDNA haplotypes and 24 chloroplast DNA (cpDNA) haplotypes were found within 86 individuals. The overall genetic diversity h (0.941 for mitochondrial, and 0.893 for chloroplast markers) and within-population diversity were higher than reported in previous population studies of S. vulgaris in the USA and Europe. The frequency of private alleles was surprisingly high - more than 90% for both kinds of markers. Most of our populations were large and located in relatively undisturbed meadows, whereas surveys in Virginia consisted of smaller roadside populations. The slow rate of population turnover in European populations is discussed as a factor responsible for the relatively high diversity of S. vulgaris in undisturbed areas of its native range. Association between mtDNA and cpDNA haplotypes was also demonstrated. Finally, gender and mtDNA haplotype were associated in the Alps populations, where females were very rare.

摘要

对来自中欧的8个蝇子草种群的线粒体和叶绿体多样性进行了详细调查,以便与先前发表的关于引入范围内蝇子草种群多样性的数据进行比较。使用Southern印迹/限制性片段长度多态性方法评估细胞色素氧化酶亚基I(coxI)基因周围的线粒体DNA(mtDNA)变异。通过对trnH和psbA基因之间的基因间隔区进行测序来评估叶绿体变异。在86个个体中发现了30种mtDNA单倍型和24种叶绿体DNA(cpDNA)单倍型。总体遗传多样性h(线粒体标记为0.941,叶绿体标记为0.893)和种群内多样性高于先前在美国和欧洲对蝇子草进行的种群研究报告。私有等位基因的频率出奇地高——两种标记均超过90%。我们的大多数种群规模较大,位于相对未受干扰的草甸中,而弗吉尼亚州的调查对象是规模较小的路边种群。欧洲种群中种群更替率较低被认为是其原生范围内未受干扰地区蝇子草多样性相对较高的一个因素。mtDNA和cpDNA单倍型之间的关联也得到了证实。最后,在阿尔卑斯山种群中,性别与mtDNA单倍型有关联,那里雌性非常罕见。

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