Khare Sagar D, Caplow Michael, Dokholyan Nikolay V
Department of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, NC 27599, USA.
Proc Natl Acad Sci U S A. 2004 Oct 19;101(42):15094-9. doi: 10.1073/pnas.0406650101. Epub 2004 Oct 8.
Mutation-induced aggregation of the dimeric enzyme Cu, Zn superoxide dismutase 1 (SOD1) has been implicated in the familial form of the disease amyotrophic lateral sclerosis, but the mechanism of aggregation is not known. Here, we show that in vitro SOD1 aggregation is a multistep reaction that minimally consists of dimer dissociation, metal loss from the monomers, and oligomerization of the apo-monomers: [reaction: see text], where D(holo), M(holo), M(apo), and A are the holo-dimer, holo-monomer, apo-monomer, and aggregate, respectively. Under aggregation-promoting conditions (pH 3.5), the rate and equilibrium constants corresponding to each step are: (i) dimer dissociation, Kd approximately 1 microM; k(off) approximately 1 x 10(-3) s(-1), k(on) approximately 1 x 10(3) M(-1).s(-1); (ii) metal loss, Km approximately 0.1 microM, km- approximately 1 x 10(-3)s(-1), km+ approximately 1 x 10(4) M(-1).s(-1); and (iii) assembly (rate-limiting step), k(agg) approximately 1 x 10(3) M(-1).s(-1). In contrast, under near-physiological conditions (pH 7.8), where aggregation is drastically reduced, dimer dissociation is less thermodynamically favorable: Kd approximately 0.1 nM, and extremely slow: k(off) approximately 3 x 10(-5) s(-1), k(on) approximately 3 x 10(5) M(-1).s(-1). Our results suggest that familial amyotrophic lateral sclerosis-linked SOD1 aggregation occurs by a mutation-induced increase in dimer dissociation and/or increase in apomonomer formation.
突变诱导的二聚体酶铜锌超氧化物歧化酶1(SOD1)聚集与肌萎缩侧索硬化症的家族形式有关,但聚集机制尚不清楚。在这里,我们表明,体外SOD1聚集是一个多步骤反应,最少包括二聚体解离、单体金属丢失以及脱辅基单体的寡聚化:[反应式:见原文],其中D(全酶)、M(全酶)、M(脱辅基)和A分别是全酶二聚体、全酶单体、脱辅基单体和聚集体。在促进聚集的条件下(pH 3.5),对应于每个步骤的速率和平衡常数为:(i)二聚体解离,Kd约为1 μM;k(解离)约为1×10⁻³ s⁻¹,k(结合)约为1×10³ M⁻¹·s⁻¹;(ii)金属丢失,Km约为0.1 μM,km⁻约为1×10⁻³ s⁻¹,km⁺约为1×10⁴ M⁻¹·s⁻¹;以及(iii)组装(限速步骤),k(聚集)约为1×10³ M⁻¹·s⁻¹。相比之下,在接近生理条件下(pH 7.8),聚集大幅减少,二聚体解离在热力学上不太有利:Kd约为0.1 nM,且极其缓慢:k(解离)约为3×10⁻⁵ s⁻¹,k(结合)约为3×10⁵ M⁻¹·s⁻¹。我们的结果表明,与家族性肌萎缩侧索硬化症相关的SOD1聚集是由突变诱导的二聚体解离增加和/或脱辅基单体形成增加所致。