Mutalik Vivek K, Singh Aditya P, Edwards Jeremy S, Venkatesh K V
Department of Chemical Engineering, Indian Institute of Technology, Powai, Mumbai, India.
Cell Biochem Biophys. 2004;41(2):179-92. doi: 10.1385/CBB:41:2:179.
The binding of effector to an allosteric protein exhibits a non-Michaelis-Menten behavior, resulting in either ultrasensitive or subsensitive response. In the present work, a modular approach has been developed to determine the response curve for allosteric systems at higher concentration of allosteric enzyme than that of effector (zero-order sensitivity, as observed in enzyme cascades) by equilibrium analysis. The analysis shows that, in an allosteric system, the zero-order effect can make the response ultrasensitive or subsensitive with respect to the enzyme concentration. The response is dependent on the number of binding sites, cooperativity, and the total effector concentration. The framework was further applied to a well studied allosteric protein, the Escherichia coli aspartate transcarbamoylase. The predictions are found to be consistent with the reported experimental data.
效应物与别构蛋白的结合呈现出非米氏行为,导致超敏感或亚敏感反应。在本研究中,已开发出一种模块化方法,通过平衡分析来确定在别构酶浓度高于效应物浓度时(如在酶级联反应中观察到的零级敏感性)别构系统的响应曲线。分析表明,在别构系统中,零级效应可使响应相对于酶浓度呈现超敏感或亚敏感。该响应取决于结合位点的数量、协同性以及效应物的总浓度。该框架进一步应用于一个研究充分的别构蛋白——大肠杆菌天冬氨酸转氨甲酰酶。发现预测结果与已报道的实验数据一致。