Taal Makie A, Sedelnikova Svetlana E, Ruzheinikov Sergey N, Baker Patrick J, Rice David W
Krebs Institute for Biomolecular Research, Department of Molecular Biology and Biotechnology, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, England.
Acta Crystallogr D Biol Crystallogr. 2004 Nov;60(Pt 11):2031-4. doi: 10.1107/S0907444904021134. Epub 2004 Oct 20.
Glutamate racemase (MurI, RacE; E.C.5.1.1.3) catalyses the cofactor-independent conversion of L-glutamate to D-glutamate, an essential step in the synthesis of components of the bacterial cell wall. The gene for RacE from Bacillus subtilis has been cloned and the protein expressed in Escherichia coli, purified and crystallized in the presence of L-glutamate using the hanging-drop method of vapour diffusion with diammonium tartrate as the precipitant. The crystals belong to the monoclinic space group C2, with approximate unit-cell parameters a = 133.6, b = 60.1, c = 126.2 A, beta = 117.6 degrees . Consideration of the possible values of V(M) suggests that the asymmetric unit contains either two (V(M) = 3.75 A(3) Da(-1)) or three (V(M) = 2.5 A(3) Da(-1)) subunits. The crystals diffract X-rays to at least 2.1 A resolution on a synchrotron-radiation source and are suitable for structural studies. Determination of the structure may provide insight into the molecular basis of substrate recognition and catalysis by this enzyme.
谷氨酸消旋酶(MurI,RacE;E.C.5.1.1.3)催化L-谷氨酸在不依赖辅因子的情况下转化为D-谷氨酸,这是细菌细胞壁成分合成中的关键步骤。已克隆出枯草芽孢杆菌中RacE的基因,并在大肠杆菌中表达该蛋白,采用以酒石酸二铵为沉淀剂的悬滴气相扩散法,在L-谷氨酸存在的条件下对其进行纯化和结晶。晶体属于单斜晶系空间群C2,近似晶胞参数为a = 133.6、b = 60.1、c = 126.2 Å,β = 117.6°。对V(M)可能值的考量表明,不对称单位包含两个(V(M) = 3.75 ų Da⁻¹)或三个(V(M) = 2.5 ų Da⁻¹)亚基。这些晶体在同步辐射源上可将X射线衍射至至少2.1 Å的分辨率,适合进行结构研究。该结构的确定可能有助于深入了解这种酶对底物识别和催化的分子基础。