Malyarchuk Svitlana, Brame Katherine L, Youngblood Reneau, Shi Runhua, Harrison Lynn
Department of Molecular and Cellular Physiology and the Feist-Weiller Cancer Center, Louisiana Health Sciences Center, 1501 Kings Highway, Shreveport, LA 71130, USA.
Nucleic Acids Res. 2004 Oct 27;32(19):5721-31. doi: 10.1093/nar/gkh911. Print 2004.
Multiply damaged sites (MDSs) are generated in DNA by ionizing radiation. In vitro studies predict that base excision repair in cells will convert MDSs to lethal double strand breaks (DSBs) when two opposing base damages are situated >/=2 bp apart. If the lesions are situated immediately 5' or 3' to each other, repair is predicted to occur sequentially due to inhibition of the DNA glycosylase by a single strand break repair intermediate. In this study, we examined how the distance between two opposing lesions alters the mutation frequency of an 8-oxodG in an MDS, and whether repair generates DSBs and deletions in bacteria. The 8-oxodG mutation frequency declined in MutY-deficient bacteria when the opposing 8-oxodG was 6 bp away, and was similar to a single 8-oxodG when the lesions were separated by 14 bp. However, the number of deletions detected for the MDSs was equivalent to the undamaged sequence. Using a separate assay, MDSs consisting of two 8-oxodG or an 8-oxodG opposite a uracil were not converted to DSBs in the absence of DNA replication in wild-type and transcription-coupled repair-deficient bacteria. This is the first study showing that DSB-repair intermediates and deletions are not formed during repair of clustered 8-oxodGs in cells.
电离辐射会在DNA中产生多处受损位点(MDSs)。体外研究预测,当两个相对的碱基损伤相隔≥2个碱基对时,细胞中的碱基切除修复会将MDSs转化为致死性双链断裂(DSBs)。如果损伤彼此紧邻位于5'或3'端,由于单链断裂修复中间体对DNA糖基化酶的抑制作用,预计修复将依次发生。在本研究中,我们研究了两个相对损伤之间的距离如何改变MDS中8-氧代鸟嘌呤(8-oxodG)的突变频率,以及修复是否会在细菌中产生双链断裂和缺失。当相对的8-oxodG相隔6个碱基对时,MutY缺陷型细菌中的8-oxodG突变频率下降,当损伤相隔14个碱基对时,其与单个8-oxodG的情况相似。然而,检测到的MDSs的缺失数量与未受损序列相当。使用单独的检测方法,在野生型和转录偶联修复缺陷型细菌中,在没有DNA复制的情况下,由两个8-oxodG或一个与尿嘧啶相对的8-oxodG组成的MDSs不会转化为双链断裂。这是第一项表明在细胞中簇状8-oxodG修复过程中不会形成双链断裂修复中间体和缺失的研究。