Park Yu Rang, Park Chan Hee, Kim Ju Han
Seoul National University Biomedical Informatics (SNUBI), Seoul National University College of Medicine, Seoul 110-799, Korea.
Bioinformatics. 2005 Mar;21(6):829-31. doi: 10.1093/bioinformatics/bti106. Epub 2004 Oct 28.
The Gene Ontology (GO) is a controlled biological vocabulary that provides three structured networks of terms to describe biological processes, cellular components and molecular functions. Many databases of gene products are annotated using the GO vocabularies. We found that some GO-updating operations are not easily traceable by the current biological databases and GO browsers. Consequently, numerous annotation errors arise and are propagated throughout biological databases and GO-based high-level analyses. GOChase is a set of web-based utilities to detect and correct the errors in GO-based annotations.
基因本体论(GO)是一个受控的生物学词汇表,它提供了三个结构化的术语网络,用于描述生物过程、细胞成分和分子功能。许多基因产物数据库都使用GO词汇进行注释。我们发现,当前的生物数据库和GO浏览器不易追踪某些GO更新操作。因此,会出现大量注释错误,并在整个生物数据库和基于GO的高级分析中传播。GOChase是一组基于网络的实用工具,用于检测和纠正基于GO的注释中的错误。