Yang Jun, Xu Guowang, Zheng Yufang, Kong Hongwei, Pang Tao, Lv Shen, Yang Qing
National Chromatographic R & A Center, Dalian Institute of Chemical Physics, Chinese Academy of Science, 116011 Dalian, China.
J Chromatogr B Analyt Technol Biomed Life Sci. 2004 Dec 25;813(1-2):59-65. doi: 10.1016/j.jchromb.2004.09.032.
Metabonomics, the study of metabolites and their roles in various disease states, is a novel methodology arising from the post-genomics era. This methodology has been applied in many fields. Current metabonomics practice has relied on mass spectrometry (MS), gas chromatography-mass spectrometry (GC-MS), liquid chromatography-mass spectrometry (LC-MS) and nuclear magnetic resonance (NMR) to analyze metabolites. In this study, a novel approach of using high-performance liquid chromatography (HPLC) in conjunction with developed software was employed. Using the principal components analysis method (PCA), all (113) peaks of urinary metabolites with a cis-diol structure from patients with hepatitis and hepatocirrhosis were compared to those from liver cancer patients. The results showed that the metabonomics-PCA method might be useful to differentiate between patients with hepatocirrhosis and hepatitis from patients with liver cancer while lowering false-positive rate. These findings also suggest that a subset of the urinary nucleosides identified with metabonomics correlate better with cancer diagnosis than the traditional single tumor marker alpha-fetoprotein (AFP).
代谢组学是对代谢物及其在各种疾病状态中的作用的研究,是后基因组时代出现的一种新方法。这种方法已应用于许多领域。目前的代谢组学实践依赖于质谱(MS)、气相色谱 - 质谱联用(GC - MS)、液相色谱 - 质谱联用(LC - MS)和核磁共振(NMR)来分析代谢物。在本研究中,采用了一种将高效液相色谱(HPLC)与开发的软件相结合的新方法。使用主成分分析方法(PCA),将肝炎和肝硬化患者具有顺式二醇结构的尿代谢物的所有(113个)峰与肝癌患者的峰进行比较。结果表明,代谢组学 - PCA方法可能有助于区分肝硬化和肝炎患者与肝癌患者,同时降低假阳性率。这些发现还表明,通过代谢组学鉴定的尿核苷子集与癌症诊断的相关性比传统的单一肿瘤标志物甲胎蛋白(AFP)更好。