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担子菌纲真菌β-微管蛋白基因序列之间的进化关系。

Evolutionary relationships among beta-tubulin gene sequences of basidiomycetous fungi.

作者信息

Begerow Dominik, John Beate, Oberwinkler Franz

机构信息

Lehrstuhl Spezielle Botanik und Mykologie, Institut für Biologie I, Universität Tübingen, Auf der Morgenstelle 1, D-72076 Tübingen, Germany.

出版信息

Mycol Res. 2004 Nov;108(Pt 11):1257-63. doi: 10.1017/s0953756204001066.

Abstract

36 fungal beta-tubulin sequences were analysed to study the evolution of this gene and the phylogeny of basidiomycetes. The analysis comprises a representative selection of all major lineages of basidiomycetous fungi and some selected ascomycetes for comparison. Intron positions vary between the different lineages, but seem to be conserved in the Hymenomycetes and Ustilaginomycetes. The most conserved regions seem to be highly susceptible for introns. Splicing and branching sites of the introns are more variable in basidiomycetes than reported from other fungal groups so far. Basidiomycete monophyly was confirmed with our data in respect to the ascomycetes studied. By analysing amino acid sequences, the Hymenomycetes and the Ustilaginomycetes were resolved as monophyletic groups. The phylogeny within these two groups is similar to that obtained with other genes. Based on beta-tubulin data Naohidea sebacea, Chionosphaera apobasidialis, Jaculispora submersa, Platygloea pustulata, Platygloea disciformis and Melampsora lini, representing the Urediniomycetes, are not resolved in most analyses. The early radiation of major basidiomycetous lineages seems to be reflected in the highly conserved beta-tubulin gene.

摘要

分析了36个真菌β-微管蛋白序列,以研究该基因的进化和担子菌的系统发育。该分析包括担子菌纲真菌所有主要谱系的代表性样本以及一些选定的子囊菌用于比较。内含子位置在不同谱系之间有所不同,但在层菌纲和黑粉菌纲中似乎是保守的。最保守的区域似乎对内含子高度敏感。担子菌纲中内含子的剪接和分支位点比迄今报道的其他真菌类群更具变异性。就所研究的子囊菌而言,我们的数据证实了担子菌纲的单系性。通过分析氨基酸序列,层菌纲和黑粉菌纲被解析为单系类群。这两个类群中的系统发育与通过其他基因获得的相似。基于β-微管蛋白数据,代表锈菌纲的皮脂柄锈菌、无柄球壳菌、浸没雅库氏菌、脓疱平盘菌、盘状平盘菌和亚麻栅锈菌在大多数分析中未得到解析。主要担子菌类群的早期辐射似乎反映在高度保守的β-微管蛋白基因中。

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