Kuttel Michelle, Naidoo Kevin J
Centre for High Performance Computing, Western Cape, South Africa.
J Am Chem Soc. 2005 Jan 12;127(1):12-3. doi: 10.1021/ja047138s.
The primary mechanism for relieving tensile strain in alpha-linked polysaccharides (e.g., [alpha-d-Glc-(1-->4)alpha-d-Glc]n) is achieved by complex rotations of the glycosidic linkages. This is shown through computer simulations of atomic force microscopy stretching experiments in combination with free energy calculations of the unfolding pattern for amylose. The experimental force-extension curve is reproduced and analyzed to reveal that the chair-to-boat conversions play a smaller role than previously proposed.