• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

α(1→4)-糖苷键的自由能表面:对多糖溶液结构和动力学的影响。

Free energy surfaces for the alpha(1 --> 4)-glycosidic linkage: implications for polysaccharide solution structure and dynamics.

作者信息

Kuttel Michelle M, Naidoo Kevin J

机构信息

Department of Chemistry, University of Cape Town, Cape Town, South Africa.

出版信息

J Phys Chem B. 2005 Apr 21;109(15):7468-74. doi: 10.1021/jp044756m.

DOI:10.1021/jp044756m
PMID:16851857
Abstract

We present a potential of mean force surface for rotation about phi and psi dihedral angles of the alpha(1 --> 4)-glycosidic linkage in the maltose disaccharide (4-O-alpha-d-glucopyranosyl-d-glucopyranose) in aqueous solution. Comparison of the vacuum and solution free energy surfaces for maltose shows the principal effects of water to be an increase in the rotational freedom of the alpha(1 --> 4) linkage brought about by lowering the energy barrier for syn to anti conformational changes as well as expansion of the range of low-energy phi,psi conformations. This free energy analysis thus provides a thermodynamic and conformational rationale for the effects of water on alpha(1 --> 4)-linked polysaccharides and carbohydrate glasses.

摘要

我们展示了麦芽糖二糖(4-O-α-D-吡喃葡萄糖基-D-吡喃葡萄糖)中α(1→4)-糖苷键围绕φ和ψ二面角旋转的平均力势面。麦芽糖在真空和溶液中的自由能面比较表明,水的主要作用是通过降低顺式到反式构象变化的能垒以及扩大低能φ、ψ构象的范围,增加α(1→4)键的旋转自由度。因此,这种自由能分析为水对α(1→4)连接的多糖和碳水化合物玻璃的影响提供了热力学和构象方面的理论依据。

相似文献

1
Free energy surfaces for the alpha(1 --> 4)-glycosidic linkage: implications for polysaccharide solution structure and dynamics.α(1→4)-糖苷键的自由能表面:对多糖溶液结构和动力学的影响。
J Phys Chem B. 2005 Apr 21;109(15):7468-74. doi: 10.1021/jp044756m.
2
Conformational free energy maps for globobiose (alpha-D-Galp-(1-->4)-beta-D-Galp) in implicit and explicit aqueous solution.在隐式和显式水溶液中,蜜二糖(α-D-吡喃半乳糖-(1→4)-β-D-吡喃半乳糖)的构象自由能图。
Carbohydr Res. 2008 May 5;343(6):1091-8. doi: 10.1016/j.carres.2008.01.038. Epub 2008 Feb 5.
3
Conformational properties of glucose-based disaccharides investigated using molecular dynamics simulations with local elevation umbrella sampling.使用局部提升伞状采样的分子动力学模拟研究基于葡萄糖的二糖的构象性质。
Carbohydr Res. 2010 Aug 16;345(12):1781-801. doi: 10.1016/j.carres.2010.05.026. Epub 2010 Jun 1.
4
Ramachandran free-energy surfaces for disaccharides: trehalose, a case study.二糖的拉马钱德兰自由能表面:海藻糖,一个案例研究。
Carbohydr Res. 2005 Apr 11;340(5):875-9. doi: 10.1016/j.carres.2005.01.031.
5
DFT studies of the disaccharide, alpha-maltose: relaxed isopotential maps.二糖α-麦芽糖的密度泛函理论(DFT)研究:松弛等势图
Carbohydr Res. 2007 Nov 5;342(15):2270-85. doi: 10.1016/j.carres.2007.06.026. Epub 2007 Jul 3.
6
Preferred conformation of the glycosidic linkage of methyl-beta-mannose.甲基-β-甘露糖糖苷键的优选构象
J Chem Phys. 2007 Jul 7;127(1):015101. doi: 10.1063/1.2747238.
7
Effect of methylation on the stability and solvation free energy of amylose and cellulose fragments: a molecular dynamics study.甲基化对直链淀粉和纤维素片段稳定性及溶剂化自由能的影响:一项分子动力学研究
Carbohydr Res. 2004 Jul 12;339(10):1697-709. doi: 10.1016/j.carres.2004.05.003.
8
A combined nuclear magnetic resonance and molecular dynamics study of the two structural motifs for mixed-linkage beta-glucans: methyl beta-cellobioside and methyl beta-laminarabioside.混合链接β-葡聚糖的两种结构基序的核磁共振和分子动力学联合研究:甲基β-纤维二糖苷和甲基β-半乳吡喃醛糖苷。
Carbohydr Res. 2010 Feb 26;345(4):474-86. doi: 10.1016/j.carres.2009.12.009. Epub 2009 Dec 22.
9
Force-field parameters of the Psi and Phi around glycosidic bonds to oxygen and sulfur atoms.糖基键氧原子和硫原子 Psi 和 Phi 周围的力场参数。
J Comput Chem. 2009 Dec;30(16):2656-65. doi: 10.1002/jcc.21245.
10
Molecular dynamics simulations of a cyclic-beta-(1-->2) glucan containing an alpha-(1-->6) linkage as a 'molecular alleviator' for the macrocyclic conformational strain.含有α-(1→6)连接作为大环构象应变“分子缓解剂”的环状β-(1→2)葡聚糖的分子动力学模拟
Carbohydr Res. 2006 Jun 12;341(8):1011-9. doi: 10.1016/j.carres.2006.02.025. Epub 2006 Mar 20.

引用本文的文献

1
Preparations of Tough and Conductive PAMPS/PAA Double Network Hydrogels Containing Cellulose Nanofibers and Polypyrroles.含纤维素纳米纤维和聚吡咯的坚韧导电PAMPS/PAA双网络水凝胶的制备
Polymers (Basel). 2020 Nov 28;12(12):2835. doi: 10.3390/polym12122835.
2
Maltodextrin-modified graphene oxide for improved enantiomeric separation of six basic chiral drugs by open-tubular capillary electrochromatography.麦芽糊精修饰的氧化石墨烯用于开管毛细管电色谱对手性药物对映体的拆分。
Mikrochim Acta. 2019 Dec 17;187(1):55. doi: 10.1007/s00604-019-4037-x.
3
Microsecond kinetics in model single- and double-stranded amylose polymers.
模型单链和双链直链淀粉聚合物中的微秒动力学
Phys Chem Chem Phys. 2014 May 7;16(17):8119-26. doi: 10.1039/c4cp00570h.
4
Density functional conformational study of 2-O-sulfated 3,6 anhydro-α-D-galactose and of neo-κ- and ι-carrabiose molecules in gas phase and water.在气相和水中对 2-O- 磺酸化 3,6 脱水-α-D-半乳糖和 neo-κ- 和 ι-卡拉胶分子的密度泛函构象研究。
J Mol Model. 2013 Feb;19(2):893-904. doi: 10.1007/s00894-012-1621-y. Epub 2012 Oct 20.
5
Marine polysaccharides in microencapsulation and application to aquaculture: "from sea to sea".微胶囊化海洋多糖及其在水产养殖中的应用:“从海洋到海洋”。
Mar Drugs. 2011 Dec;9(12):2572-2604. doi: 10.3390/md9122572. Epub 2011 Dec 8.
6
Conformational properties of methyl β-maltoside and methyl α- and β-cellobioside disaccharides.甲基-β-麦芽寡糖和甲基-α-、β-纤维二糖二糖的构象性质。
J Phys Chem B. 2011 Jan 27;115(3):597-608. doi: 10.1021/jp109475p. Epub 2010 Dec 15.