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含有4-氨基-1,2-二硫杂环戊烷-4-羧酸(Adt)的肽:Boc-Adt-Adt-NHMe的构象及N-H...S相互作用

Peptides containing 4-amino-1,2-dithiolane-4-carboxylic acid (Adt): conformation of Boc-Adt-Adt-NHMe and NH...S interactions.

作者信息

Morera Enrico, Nalli Marianna, Mollica Adriano, Paglialunga Paradisi Mario, Aschi Massimiliano, Gavuzzo Enrico, Mazza Fernando, Lucente Gino

机构信息

Dipartimento di Studi Farmaceutici, Università di Roma La Sapienza and Istituto di Chimica Biomolecolare, Sezione di Roma, CNR, 00185 Roma, Italy.

出版信息

J Pept Sci. 2005 Feb;11(2):104-12. doi: 10.1002/psc.602.

Abstract

To study the conformational preferences induced by the insertion of the 4-amino-1,2-dithiolane-4-carboxylic acid (Adt) residue into a peptide backbone, the achiral N-protected dipeptide methylamide Boc-Adt-Adt-NHMe (1) was synthesized and its crystal state and solution conformation studied and compared with that exhibited by its carba-analogue Boc-Ac5c-Ac5c-NHMe containing two residues of 1-aminocyclopentane-1-carboxylic acid (Ac5c). Compound 1 in the crystal adopts a type-III beta-turn conformation and an analogous structure is that preferred in chloroform solution as established by 1H-NMR and NOE information. In the crystal packing three different Adt rings form a cavity and the involved sulphur atoms give rise to unusual multiple interactions with one NH group. The chemical nature of these intermolecular and intramolecular main-chain...side-chain NH...S interactions are discussed in terms of quantum chemical calculations.

摘要

为了研究将4-氨基-1,2-二硫杂环戊烷-4-羧酸(Adt)残基插入肽主链所诱导的构象偏好,合成了非手性的N-保护二肽甲基酰胺Boc-Adt-Adt-NHMe(1),并研究了其晶体状态和溶液构象,并与含有两个1-氨基环戊烷-1-羧酸(Ac5c)残基的碳环类似物Boc-Ac5c-Ac5c-NHMe所呈现的构象进行比较。晶体中的化合物1采用III型β-转角构象,通过1H-NMR和NOE信息确定,类似结构在氯仿溶液中更受青睐。在晶体堆积中,三个不同的Adt环形成一个空腔,所涉及的硫原子与一个NH基团产生不寻常的多重相互作用。根据量子化学计算讨论了这些分子间和分子内主链……侧链NH……S相互作用的化学性质。

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