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贝类中创伤弧菌临床菌株和环境菌株的多重PCR检测

Multiplex PCR detection of clinical and environmental strains of Vibrio vulnificus in shellfish.

作者信息

Panicker Gitika, Vickery Michael C L, Bej Asim K

机构信息

Department of Biology, University of Alabama at Birmingham, 1300 University Boulevard, Birmingham, AL 35294-1170, USA.

出版信息

Can J Microbiol. 2004 Nov;50(11):911-22. doi: 10.1139/w04-085.

Abstract

In this study, we developed a PCR-based rapid detection method for clinically important pathogenic strains of Vibrio vulnificus. Positive amplification of the 504-bp viuB fragment was seen in all 22 clinical isolates tested but only in 8 out of 33 environmental isolates. The combination of the species-specific 205-bp vvh fragment along with viuB in a multiplexed PCR enabled us to confirm the presence of potentially pathogenic strains of V. vulnificus. No amplification of other Vibrio spp. or non-Vibrio bacteria was evidenced, suggesting a high specificity of detection by this method. The sensitivity of detection for both targeted genes was 10 pg of purified DNA, which correlated with 10(3) V. vulnificus CFU in 1 mL of pure culture or 1 g un-enriched seeded oyster tissue homogenate. This sensitivity was improved to 1 CFU per gram of oyster tissue homogenate in overnight-enriched samples. A SYBR Green I based real-time PCR method was also developed that was shown to produce results consistent with the conventional PCR method. Application of the multiplexed real-time PCR to natural oyster tissue homogenates exhibited positive detection of vvh in 51% of the samples collected primarily during the summer months; however, only 15% of vvh positive samples exhibited viuB amplicons. The rapid, sensitive, and specific detection of clinically important pathogenic V. vulnificus in shellfish would be beneficial in reducing illnesses and deaths caused by this pathogen.

摘要

在本研究中,我们开发了一种基于聚合酶链反应(PCR)的快速检测方法,用于检测临床重要的创伤弧菌致病菌株。在所检测的22株临床分离株中,均可见504bp的viuB片段呈阳性扩增,但在33株环境分离株中只有8株呈阳性扩增。在多重PCR中,物种特异性的205bp vvh片段与viuB片段相结合,使我们能够确认创伤弧菌潜在致病菌株的存在。未发现其他弧菌属或非弧菌属细菌有扩增现象,表明该方法检测特异性高。两种靶基因的检测灵敏度均为10pg纯化DNA,这与1mL纯培养物或1g未富集的接种牡蛎组织匀浆中的10³CFU创伤弧菌相关。在过夜富集的样本中,这种灵敏度提高到每克牡蛎组织匀浆1CFU。还开发了一种基于SYBR Green I的实时PCR方法,结果显示与传统PCR方法一致。将多重实时PCR应用于天然牡蛎组织匀浆,结果显示,主要在夏季采集的样本中,51%检测到vvh呈阳性;然而,只有15%的vvh阳性样本显示有viuB扩增子。快速、灵敏且特异检测贝类中临床重要的致病创伤弧菌,将有助于减少该病原菌引起的疾病和死亡。

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