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统一温度对细菌生长速率和球状蛋白质稳定性的影响。

Unifying temperature effects on the growth rate of bacteria and the stability of globular proteins.

作者信息

Ratkowsky David A, Olley June, Ross Tom

机构信息

School of Agricultural Science and Australian Food Safety Centre of Excellence, University of Tasmania, Private Bag 54, Hobart, Tasmania 7001, Australia.

出版信息

J Theor Biol. 2005 Apr 7;233(3):351-62. doi: 10.1016/j.jtbi.2004.10.016. Epub 2004 Nov 30.

Abstract

The specific growth rate constant for bacterial growth does not obey the Arrhenius-type kinetics displayed by simple chemical reactions. Instead, for bacteria, steep convex curves are observed on an Arrhenius plot at the low- and high-temperature ends of the biokinetic range, with a region towards the middle of the growth range loosely approximating linearity. This central region has been considered by microbiologists to be the "normal physiological range" for bacterial growth, a concept whose meaningfulness we now question. We employ a kinetic model incorporating thermodynamic terms for temperature-induced enzyme denaturation, central to which is a term to account for the large positive heat capacity change during unfolding of the proteins within the bacteria. It is now widely believed by biophysicists that denaturation of complex proteins and/or other macromolecules is due to hydrophobic hydration of non-polar compounds. Denaturation is seen as the process by which enthalpic and entropic forces becomes imbalanced both at high and at low temperatures resulting in conformational changes in the enzyme structure that expose hydrophobic amino acid groups to the surrounding water molecules. The "thermodynamic" rate model, incorporating the heat capacity change and its effect on the enthalpy and entropy of the system, fitted 35 sets of data for psychrophilic, psychrotrophic, mesophilic and thermophilic bacteria well, resulting in biologically meaningful estimates for the important thermodynamic parameters. As these results mirror those obtained by biophysicists for globular proteins, it appears that the same or a similar mechanism applies to bacteria as applies to proteins.

摘要

细菌生长的比生长速率常数并不遵循简单化学反应所呈现的阿累尼乌斯型动力学。相反,对于细菌而言,在生物动力学范围的低温和高温端,阿累尼乌斯图上会观察到陡峭的凸曲线,而在生长范围中间部分有一个区域大致近似线性。微生物学家认为这个中间区域是细菌生长的“正常生理范围”,但我们现在对这一概念的意义提出质疑。我们采用了一个包含温度诱导酶变性的热力学项的动力学模型,其中核心是一个用于解释细菌内蛋白质展开过程中热容量大幅正变化的项。现在生物物理学家普遍认为,复杂蛋白质和/或其他大分子的变性是由于非极性化合物的疏水水合作用。变性被视为一个过程,即在高温和低温下,焓力和熵力都会失衡,导致酶结构发生构象变化,使疏水氨基酸基团暴露于周围水分子中。这个“热力学”速率模型,结合了热容量变化及其对系统焓和熵的影响,很好地拟合了35组嗜冷菌、嗜冷耐温菌、嗜温菌和嗜热菌的数据,得出了具有生物学意义的重要热力学参数估计值。由于这些结果与生物物理学家对球状蛋白质所获得的结果相似,似乎适用于蛋白质的相同或类似机制也适用于细菌。

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