Korsinczky Michael L J, Clark Richard J, Craik David J
Institute for Molecular Bioscience, University of Queensland, Brisbane, Queensland 4072, Australia.
Biochemistry. 2005 Feb 1;44(4):1145-53. doi: 10.1021/bi048297r.
SFTI-1 is a novel 14 amino acid peptide comprised of a circular backbone constrained by three proline residues, a hydrogen-bond network, and a single disulfide bond. It is the smallest and most potent known Bowman-Birk trypsin inhibitor and the only one with a cyclic peptidic backbone. The solution structure of [ABA(3,11)]SFTI-1, a disulfide-deficient analogue of SFTI-1, has been determined by (1)H NMR spectroscopy. The lowest energy structures of native SFTI-1 and [ABA(3,11)]SFTI-1 are similar and superimpose with a root-mean-square deviation over the backbone and heavy atoms of 0.26 +/- 0.09 and 1.10 +/- 0.22 A, respectively. The disulfide bridge in SFTI-1 was found to be a minor determinant for the overall structure, but its removal resulted in a slightly weakened hydrogen-bonding network. To further investigate the role of the disulfide bridge, NMR chemical shifts for the backbone H(alpha) protons of two disulfide-deficient linear analogues of SFTI-1, [ABA(3,11)]SFTI-1[6,5] and [ABA(3,11)]SFTI-1[1,14] were measured. These correspond to analogues of the cleavage product of SFTI-1 and a putative biosynthetic precursor, respectively. In contrast with the cyclic peptide, it was found that the disulfide bridge is essential for maintaining the structure of these open-chain analogues. Overall, the hydrogen-bond network appears to be a crucial determinant of the structure of SFTI-1 analogues.
SFTI-1是一种由14个氨基酸组成的新型肽,其环状主链由三个脯氨酸残基、一个氢键网络和一个二硫键构成。它是已知最小且最有效的鲍曼-伯克胰蛋白酶抑制剂,也是唯一具有环状肽主链的抑制剂。已通过¹H NMR光谱法测定了SFTI-1的二硫键缺陷类似物[ABA(3,11)]SFTI-1的溶液结构。天然SFTI-1和[ABA(3,11)]SFTI-1的最低能量结构相似,主链和重原子的均方根偏差分别为0.26±0.09 Å和1.10±0.22 Å。发现SFTI-1中的二硫键对整体结构的影响较小,但其去除导致氢键网络略有减弱。为了进一步研究二硫键的作用,测量了SFTI-1的两种二硫键缺陷线性类似物[ABA(3,11)]SFTI-1[6,5]和[ABA(3,11)]SFTI-1[1,14]主链Hα质子的NMR化学位移。这些分别对应于SFTI-1的裂解产物和假定的生物合成前体的类似物。与环状肽不同,发现二硫键对于维持这些开链类似物的结构至关重要。总体而言,氢键网络似乎是SFTI-1类似物结构的关键决定因素。