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植物和真菌中的环状蛋白。

Circular proteins from plants and fungi.

机构信息

Division of Pharmacognosy, Department of Medicinal Chemistry, Biomedical Centre, Uppsala University, SE-75123 Uppsala, Sweden.

出版信息

J Biol Chem. 2012 Aug 3;287(32):27001-6. doi: 10.1074/jbc.R111.300129. Epub 2012 Jun 14.

DOI:10.1074/jbc.R111.300129
PMID:22700984
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3411036/
Abstract

Circular proteins, defined as head-to-tail cyclized polypeptides originating from ribosomal synthesis, represent a novel class of natural products attracting increasing interest. From a scientific point of view, these compounds raise questions of where and why they occur in nature and how they are formed. From a rational point of view, these proteins and their structural concept may be exploited for crop protection and novel pharmaceuticals. Here, we review the current knowledge of three protein families: cyclotides and circular sunflower trypsin inhibitors from the kingdom of plants and the Amanita toxins from fungi. A particular emphasis is placed on their biological origin, structure, and activity. In addition, the opportunity for discovery of novel circular proteins and recent insights into their mechanism of action are discussed.

摘要

环状蛋白,定义为源自核糖体合成的头尾环化多肽,代表了一类新兴的天然产物,引起了越来越多的关注。从科学的角度来看,这些化合物提出了它们在自然界中出现的位置、原因以及它们是如何形成的问题。从理性的角度来看,这些蛋白质及其结构概念可能被用于作物保护和新型药物。在这里,我们回顾了三种蛋白质家族的最新知识:来自植物王国的环肽和向日葵胰蛋白酶抑制剂,以及真菌中的鹅膏蕈毒素。特别强调了它们的生物起源、结构和活性。此外,还讨论了发现新型环状蛋白的机会以及对其作用机制的最新见解。

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1
Circular proteins from plants and fungi.植物和真菌中的环状蛋白。
J Biol Chem. 2012 Aug 3;287(32):27001-6. doi: 10.1074/jbc.R111.300129. Epub 2012 Jun 14.
2
Circular proteins in plants: solution structure of a novel macrocyclic trypsin inhibitor from Momordica cochinchinensis.植物中的环状蛋白质:来自罗汉果的一种新型大环胰蛋白酶抑制剂的溶液结构
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3
Natural structural diversity within a conserved cyclic peptide scaffold.保守环肽支架内的天然结构多样性。
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4
Disulfide folding pathways of cystine knot proteins. Tying the knot within the circular backbone of the cyclotides.胱氨酸结蛋白的二硫键折叠途径。在环肽的环状主链内打结。
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5
Squash trypsin inhibitors from Momordica cochinchinensis exhibit an atypical macrocyclic structure.来自罗汉果的南瓜胰蛋白酶抑制剂具有非典型的大环结构。
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Ribosomally encoded cyclic peptide toxins from mushrooms.来自蘑菇的核糖体编码环肽毒素。
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引用本文的文献

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Enzyme-free biochemical production of seamlessly N-to-C cyclized peptides from natural or recombinant proteins.从天然或重组蛋白质中无酶生化生产无缝N端到C端环化肽。
bioRxiv. 2025 Aug 2:2025.07.31.667801. doi: 10.1101/2025.07.31.667801.
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Advances in cyclotide research: bioactivity to cyclotide-based therapeutics.环肽研究进展:从生物活性到基于环肽的疗法
Mol Divers. 2025 Jan 25. doi: 10.1007/s11030-025-11113-w.
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Differential Blood-Brain Barrier Transport and Cell Uptake of Cyclic Peptides In Vivo and In Vitro.环肽在体内和体外的血脑屏障转运及细胞摄取差异
Pharmaceutics. 2023 May 16;15(5):1507. doi: 10.3390/pharmaceutics15051507.
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Peptide Toxins as Biothreats and the Potential for AI Systems to Enhance Biosecurity.作为生物威胁的肽毒素以及人工智能系统增强生物安全的潜力。
Front Bioeng Biotechnol. 2022 Mar 8;10:860390. doi: 10.3389/fbioe.2022.860390. eCollection 2022.
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Solution NMR and racemic crystallography provide insights into a novel structural class of cyclic plant peptides.溶液核磁共振和外消旋晶体学为一类新型环状植物肽的结构提供了见解。
RSC Chem Biol. 2021 Sep 13;2(6):1682-1691. doi: 10.1039/d1cb00155h. eCollection 2021 Dec 2.
6
"Protein" no longer means what it used to.“蛋白质”已不再是过去的含义了。
Curr Res Struct Biol. 2021 Jul 7;3:146-152. doi: 10.1016/j.crstbi.2021.06.002. eCollection 2021.
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Cyclotides from Brazilian and Their Effects on Human Lymphocytes.巴西麻中的环肽及其对人淋巴细胞的影响。
J Nat Prod. 2021 Jan 22;84(1):81-90. doi: 10.1021/acs.jnatprod.0c01069. Epub 2021 Jan 4.
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Plant Antimicrobial Peptides: State of the Art, In Silico Prediction and Perspectives in the Omics Era.植物抗菌肽:现状、计算机模拟预测及组学时代的展望
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Papain-like cysteine proteases prepare plant cyclic peptide precursors for cyclization.半胱氨酸蛋白酶类木瓜蛋白酶使植物环肽前体进行环化。
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本文引用的文献

1
Cycloquest: identification of cyclopeptides via database search of their mass spectra against genome databases.环肽搜索:通过将其质谱与基因组数据库进行数据库搜索来鉴定环肽。
J Proteome Res. 2011 Oct 7;10(10):4505-12. doi: 10.1021/pr200323a. Epub 2011 Sep 7.
2
Cyclotide-membrane interactions: defining factors of membrane binding, depletion and disruption.环肽与膜的相互作用:膜结合、消耗和破坏的决定性因素
Biochim Biophys Acta. 2011 Nov;1808(11):2665-73. doi: 10.1016/j.bbamem.2011.07.004. Epub 2011 Jul 20.
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Optimal oxidative folding of the novel antimicrobial cyclotide from Hedyotis biflora requires high alcohol concentrations.新型抗菌环肽 Hedyotis biflora 的最佳氧化折叠需要高浓度的醇。
Biochemistry. 2011 Aug 23;50(33):7275-83. doi: 10.1021/bi2007004. Epub 2011 Jul 25.
4
Decoding the membrane activity of the cyclotide kalata B1: the importance of phosphatidylethanolamine phospholipids and lipid organization on hemolytic and anti-HIV activities.解析环肽 kalata B1 的膜活性:溶血和抗 HIV 活性中磷脂酰乙醇胺磷脂和脂质组织的重要性。
J Biol Chem. 2011 Jul 8;286(27):24231-41. doi: 10.1074/jbc.M111.253393. Epub 2011 May 16.
5
The chemistry of cyclotides.环肽的化学。
J Org Chem. 2011 Jun 17;76(12):4805-17. doi: 10.1021/jo200520v. Epub 2011 May 19.
6
Albumins and their processing machinery are hijacked for cyclic peptides in sunflower.向日葵中循环肽劫持了白蛋白及其加工机器。
Nat Chem Biol. 2011 May;7(5):257-9. doi: 10.1038/nchembio.542. Epub 2011 Mar 20.
7
Biomedicine in the environment: cyclotides constitute potent natural toxins in plants and soil bacteria.环境中的生物医学:环肽在植物和土壤细菌中构成了强效的天然毒素。
Environ Toxicol Chem. 2011 May;30(5):1190-6. doi: 10.1002/etc.496. Epub 2011 Mar 18.
8
Discovery of cyclotides in the fabaceae plant family provides new insights into the cyclization, evolution, and distribution of circular proteins.在豆科植物家族中发现环肽为环状蛋白的环化、进化和分布提供了新的见解。
ACS Chem Biol. 2011 Apr 15;6(4):345-55. doi: 10.1021/cb100388j. Epub 2011 Jan 20.
9
Genome mining for ribosomally synthesized natural products.基因组挖掘核糖体合成的天然产物。
Curr Opin Chem Biol. 2011 Feb;15(1):11-21. doi: 10.1016/j.cbpa.2010.10.027. Epub 2010 Nov 20.
10
Colocalization of amanitin and a candidate toxin-processing prolyl oligopeptidase in Amanita basidiocarps.鹅膏毒肽与一种候选毒素加工脯氨酰寡肽酶在鹅膏菌子实体中的共定位。
Eukaryot Cell. 2010 Dec;9(12):1891-900. doi: 10.1128/EC.00161-10. Epub 2010 Oct 1.