Kanamaru Shuji, Ishiwata Yasutaka, Suzuki Toshiharu, Rossmann Michael G, Arisaka Fumio
Department of Biological Sciences, Purdue University, 915 W. State Street, West Lafayette, IN 47907-2054, USA.
J Mol Biol. 2005 Mar 4;346(4):1013-20. doi: 10.1016/j.jmb.2004.12.042. Epub 2005 Jan 25.
Bacteriophage T4 has an efficient mechanism for injecting the host Escherichiacoli cell with genomic DNA. Its gene product 5 (gp5) has a needle-like structure attached to the end of a tube through which the DNA passes on its way out of the head and into the host. The gp5 needle punctures the outer cell membrane and then digests the peptidoglycan cell wall in the periplasmic space. gp5 is normally post-translationally cleaved between residues 351 and 352. The function of this process in controlling the lysozyme activity of gp5 has now been investigated. When gp5 is over-expressed in E.coli, two mutants (S351H and S351A) showed a reduction of cleavage products and five other mutants (S351L, S351K, S351Y, S351Q, and S351T) showed no cleavage. Furthermore, in a complementation assay at 20 degrees C, the mutants that had no cleavage of gp5 produced a reduced number of plaques compared to wild-type T4. The crystal structure of the non-cleavage phenotype mutant of gp5, S351L, complexed with gene product 27, showed that the 18 residues in the vicinity of the potential cleavage site (disordered in the wild-type structure) had visible electron density. The polypeptide around the potential cleavage site is exposed, thus allowing access for an E.coli protease. The lysozyme activity is inhibited in the wild-type structure by a loop from the adjacent gp5 monomer that binds into the substrate-binding site. The same inhibition is apparent in the mutant structure, showing that the lysozyme is inhibited before gp5 is cleaved and, presumably, the lysozyme is activated only after gp5 has penetrated the outer membrane.
噬菌体T4具有一种将基因组DNA注入宿主大肠杆菌细胞的有效机制。其基因产物5(gp5)具有一个针状结构,该结构附着在一个管子的末端,DNA在从头部出来并进入宿主的过程中通过这个管子。gp5针穿透细胞外膜,然后消化周质空间中的肽聚糖细胞壁。gp5通常在351和352位残基之间进行翻译后切割。现在已经研究了这个过程在控制gp5溶菌酶活性方面的功能。当gp5在大肠杆菌中过表达时,两个突变体(S351H和S351A)的切割产物减少,另外五个突变体(S351L、S351K、S351Y、S351Q和S351T)没有切割。此外,在20摄氏度的互补试验中,与野生型T4相比,未切割gp5的突变体产生的噬菌斑数量减少。与基因产物27复合的gp5非切割表型突变体S351L的晶体结构表明,潜在切割位点附近的18个残基(在野生型结构中无序)具有可见的电子密度。潜在切割位点周围的多肽是暴露的,因此允许大肠杆菌蛋白酶进入。在野生型结构中,溶菌酶活性被相邻gp5单体的一个环抑制,该环结合到底物结合位点。在突变体结构中也有同样的抑制作用,这表明溶菌酶在gp5被切割之前就被抑制了,推测溶菌酶只有在gp5穿透外膜后才被激活。