de Gruijter J M, Gasser R B, Polderman A M, Asigri V, Dijkshoorn L
Department of Parasitology, Leiden University Medical Center, University of Leiden, PO Box 9600, 2300 RC Leiden, The Netherlands.
Parasitology. 2005 Feb;130(Pt 2):229-37. doi: 10.1017/s0031182004006249.
An AFLP approach was established to investigate genetic diversity within Oesophagostomum bifurcum (order Strongylida) from human and non-human primates. Evaluation of different combinations of restriction enzymes (n = 8) and primers (n = 29) demonstrated that the use of HindIII/BglII digested templates and primers with the selective nucleotides + AG/ +AC, respectively, was the most effective for the analysis of O. bifurcum DNA. A total of 63 O. bifurcum adults from human, Patas monkey, Mona monkey and Olive baboon hosts from different geographical regions in Ghana were subjected to analysis using this method. Cluster analysis revealed 4 genetically distinct groups, namely O. bifurcum from the Patas monkey (I), from the Mona monkey (II), from humans (III) and from the Olive baboon (IV). These findings were concordant with those achieved previously using RAPD analysis and supports population genetic substructuring within O. bifurcum according to host species. The results demonstrated the effectiveness of the present AFLP method for establishing genetic variation within O. bifurcum, and indicates its applicability to other parasitic nematodes of human and/or veterinary health importance.
建立了一种扩增片段长度多态性(AFLP)方法,以研究来自人类和非人灵长类动物的叉尾食道口线虫(圆线目)的遗传多样性。对限制性内切酶(n = 8)和引物(n = 29)的不同组合进行评估表明,分别使用经HindIII/BglII消化的模板和带有选择性核苷酸+AG/+AC的引物,对叉尾食道口线虫DNA的分析最为有效。使用该方法对来自加纳不同地理区域的人类、赤猴、戴安娜须猴和东非狒狒宿主的63条叉尾食道口线虫成虫进行了分析。聚类分析揭示了4个遗传上不同的群体,即来自赤猴的叉尾食道口线虫(I)、来自戴安娜须猴的(II)、来自人类的(III)和来自东非狒狒的(IV)。这些发现与先前使用随机扩增多态性DNA(RAPD)分析所获得的结果一致,并支持根据宿主物种对叉尾食道口线虫进行群体遗传亚结构分析。结果证明了当前AFLP方法在确定叉尾食道口线虫遗传变异方面的有效性,并表明其适用于对人类和/或兽医健康具有重要意义的其他寄生线虫。