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朝鲜族人群的分子特征:诊断策略的制定

Molecular characterization of D- Korean persons: development of a diagnostic strategy.

作者信息

Kim Ji Yeon, Kim Sung Yeun, Kim Chong-Ahm, Yon Gyu Sung, Park Sung Sup

机构信息

Blood Transfusion Research Institute, Korean Red Cross, Seoul, Korea.

出版信息

Transfusion. 2005 Mar;45(3):345-52. doi: 10.1111/j.1537-2995.2005.04311.x.

Abstract

BACKGROUND

D- frequencies show wide racial differences: in particular, in Korean persons it is approximately 1/100th of that in Caucasians (0.15% vs. 15%). The molecular mechanisms of D- may be unique to races, and thus specific molecular diagnostic approaches are necessary for individual races. Such marked racial differences have been attributed to the founder effect. It was hypothesized that D- frequencies may be affected by genomic variations of Rhesus boxes, which are instruments of unequal crossing-over.

STUDY DESIGN AND METHODS

First, the molecular basis of D- in Korean donors was characterized. A total of 264 D- persons were analyzed by performing RHD exon polymerase chain reaction (PCR), Rhesus box hybrid PCR-PstI, RHD sequencing, and a novel RHD-CE-D hybrid PCR. Second, with sequencing analysis, Rhesus boxes in Korean and Caucasian persons were compared.

RESULTS

Of 264 D- Korean individuals, 74 percent completely lacked RHD, 9 percent had RHD-CE-D hybrid, and 17 percent had point mutations. Three genetic causes, RHD deletion, RHD-CE(2-9)-D2, and 1227G>A, explained 99.4 percent of D- alleles in Korean persons. Three novel mutations were also found. The identity region of 10 Rhesus boxes in Korean persons was in complete concordance with that in Caucasian persons.

CONCLUSION

In this study, a molecular diagnostic strategy was established and the genetic causes of almost all D- Korean persons was able to be diagnosed with a simple decision tree. The study provides a good example of the molecular diagnosis of D- persons, especially in low-frequency areas. Our hypothesis that D- frequencies are affected by genomic variations in Rhesus boxes was excluded. Rather, racial differences may be influenced by the founder effect.

摘要

背景

D-频率存在广泛的种族差异:特别是在韩国人中,其频率约为白种人的1/100(0.15%对15%)。D-的分子机制可能因种族而异,因此针对不同种族需要特定的分子诊断方法。这种显著的种族差异被归因于奠基者效应。据推测,D-频率可能受恒河猴盒的基因组变异影响,恒河猴盒是不等交换的工具。

研究设计与方法

首先,对韩国献血者中D-的分子基础进行了表征。通过进行RHD外显子聚合酶链反应(PCR)、恒河猴盒杂交PCR-PstI、RHD测序以及一种新型的RHD-CE-D杂交PCR,对总共264名D-个体进行了分析。其次,通过测序分析,比较了韩国人和白种人中的恒河猴盒。

结果

在264名韩国D-个体中,74%完全缺乏RHD,9%有RHD-CE-D杂交型,17%有单核苷酸突变。三种遗传原因,即RHD缺失、RHD-CE(2-9)-D2和1227G>A,解释了韩国人中99.4%的D-等位基因。还发现了三种新突变。韩国人10个恒河猴盒的同源区域与白种人完全一致。

结论

在本研究中,建立了一种分子诊断策略,几乎所有韩国D-个体的遗传原因都能够通过简单的决策树进行诊断。该研究为D-个体的分子诊断提供了一个很好的例子,特别是在低频区域。我们关于D-频率受恒河猴盒基因组变异影响的假设被排除。相反,种族差异可能受奠基者效应影响。

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