Sato Aya, Kobayashi Gengo, Hayashi Hiroshi, Yoshida Hideji, Wada Akira, Maeda Maki, Hiraga Sota, Takeyasu Kunio, Wada Chieko
Laboratory of Plasma Membrane and Nuclear Signaling, Graduate School of Biostudies, Kyoto University, Kitashirakawa-Oiwake, Sakyo, Kyoto 606-8502, Japan.
Genes Cells. 2005 May;10(5):393-408. doi: 10.1111/j.1365-2443.2005.00851.x.
Obg proteins belong to a subfamily of GTP binding proteins, which are highly conserved from bacteria to human. Mutations of obgE genes cause pleiotropic defects in various species but the function remained unclear. Here we examine the function of ObgE, the Obg homolog in Escherichia coli. The growth rate correlates with the amount of ObgE in cells. Co-fractionation experiments further suggest that ObgE binds to 30S and 50S ribosomal subunits, but not to 70S ribosome. Pull-down assays suggest that ObgE associates with several specific ribosomal proteins of 30S and 50S subunits, as well as RNA helicase CsdA. Purified ObgE cosediments with 16S and 23S ribosomal RNAs in vitro in the presence of GTP. Finally, mutation of ObgE affects pre-16Sr-RNA processing, ribosomal protein levels, and ribosomal protein modification, thereby significantly reducing 70S ribosome levels. This evidence implicates that ObgE functions in ribosomal biogenesis, presumably through the binding to rRNAs and/or rRNA-ribosomal protein complexes, perhaps as an rRNA/ribosomal protein folding chaperone or scaffold protein.
Obg蛋白属于GTP结合蛋白亚家族,从细菌到人类高度保守。obgE基因的突变在各种物种中会导致多效性缺陷,但其功能仍不清楚。在此,我们研究了大肠杆菌中ObgE的同源物ObgE的功能。生长速率与细胞中ObgE的量相关。共分级实验进一步表明,ObgE与30S和50S核糖体亚基结合,但不与70S核糖体结合。下拉实验表明,ObgE与30S和50S亚基的几种特定核糖体蛋白以及RNA解旋酶CsdA相关联。在GTP存在的情况下,纯化的ObgE在体外与16S和23S核糖体RNA共沉降。最后,ObgE的突变影响前16S r-RNA加工、核糖体蛋白水平和核糖体蛋白修饰,从而显著降低70S核糖体水平。这一证据表明,ObgE在核糖体生物合成中发挥作用,可能是通过与rRNA和/或rRNA-核糖体蛋白复合物结合,也许作为rRNA/核糖体蛋白折叠伴侣或支架蛋白。