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核磁共振片段筛选:攻克蛋白质-蛋白质相互作用靶点

NMR fragment screening: tackling protein-protein interaction targets.

作者信息

Schade Markus, Oschkinat Hartmut

机构信息

Combinature Biopharm AG, 13125 Berlin, Germany.

出版信息

Curr Opin Drug Discov Devel. 2005 May;8(3):365-73.

Abstract

High-throughput screening of libraries containing compounds of 'drug-like' molecular weight has frequently resulted in no or poor drug candidates, especially when screening against demanding drug targets such as protein-protein interactions. Fragment-based lead discovery and optimization has evolved as a promising solution to this problem by combining the universal adaptability of low-molecular-weight fragments with immediate structural information on fragment binding modes. This review focuses on nuclear magnetic resonance (NMR) fragment screening techniques, which provide a unique combination of medium-throughput, direct binding site information and broad applicability. The utility and exemplary data of chemical shift-detected NMR fragment screening applied to the challenging protein-protein interaction target PDZ domains are summarized.

摘要

对含有“类药物”分子量化合物的文库进行高通量筛选,常常得不到药物候选物或得到的候选物不佳,尤其是在针对诸如蛋白质-蛋白质相互作用等苛刻的药物靶点进行筛选时。基于片段的先导化合物发现与优化已发展成为解决这一问题的一种有前景的方法,它将低分子量片段的普遍适应性与片段结合模式的直接结构信息结合起来。本综述聚焦于核磁共振(NMR)片段筛选技术,该技术提供了中等通量、直接结合位点信息和广泛适用性的独特组合。总结了将化学位移检测的NMR片段筛选应用于具有挑战性的蛋白质-蛋白质相互作用靶点PDZ结构域的实用性和示例数据。

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