• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

由自然发生的转座子反向重复引发的可遗传转座子沉默。

Heritable transposon silencing initiated by a naturally occurring transposon inverted duplication.

作者信息

Slotkin R Keith, Freeling Michael, Lisch Damon

机构信息

Department of Plant and Microbial Biology, 111 Koshland Hall, University of California Berkeley, Berkeley, California 94720, USA.

出版信息

Nat Genet. 2005 Jun;37(6):641-4. doi: 10.1038/ng1576. Epub 2005 May 22.

DOI:10.1038/ng1576
PMID:15908951
Abstract

It has been suggested that gene silencing evolved as a defense against genomic parasites such as transposons. This idea is based on analysis of mutations that reactivate transposons that are stably silenced: they affect maintenance rather than initiation of silencing. Here we describe the cloning and characterization of a naturally occurring locus able to heritably silence the otherwise highly active MuDR transposon in maize. This locus, Mu killer (Muk), results from the inverted duplication of a partially deleted autonomous MuDR element located at the breakpoint of a genomic deletion. Muk produces a hybrid hairpin transcript that is processed into small RNAs, which are amplified when the target MuDR transcript is present. Muk provides the first example of a naturally occurring transposon derivative capable of initiating the heritable silencing of an active transposon family. Further, transposon-generated inverted duplications may be important for the generation of double-stranded RNAs used in gene silencing.

摘要

有人提出,基因沉默是作为一种针对转座子等基因组寄生虫的防御机制而进化的。这一观点基于对使稳定沉默的转座子重新激活的突变的分析:这些突变影响的是沉默的维持而非起始。在此,我们描述了一个能够遗传性地沉默玉米中原本高度活跃的MuDR转座子的天然位点的克隆与特性分析。这个位点,即Mu杀手(Muk),是由位于基因组缺失断点处的一个部分缺失的自主MuDR元件的反向重复产生的。Muk产生一种杂合发夹转录本,该转录本被加工成小RNA,当存在靶标MuDR转录本时,这些小RNA会被扩增。Muk提供了首个能够起始活跃转座子家族遗传性沉默的天然转座子衍生物的实例。此外,转座子产生的反向重复可能对于用于基因沉默的双链RNA的产生很重要。

相似文献

1
Heritable transposon silencing initiated by a naturally occurring transposon inverted duplication.由自然发生的转座子反向重复引发的可遗传转座子沉默。
Nat Genet. 2005 Jun;37(6):641-4. doi: 10.1038/ng1576. Epub 2005 May 22.
2
Mu killer causes the heritable inactivation of the Mutator family of transposable elements in Zea mays.Mu杀手导致玉米中转座因子Mutator家族的遗传性失活。
Genetics. 2003 Oct;165(2):781-97. doi: 10.1093/genetics/165.2.781.
3
Initiation, establishment, and maintenance of heritable MuDR transposon silencing in maize are mediated by distinct factors.玉米中可遗传的MuDR转座子沉默的起始、建立和维持由不同因素介导。
PLoS Biol. 2006 Oct;4(10):e339. doi: 10.1371/journal.pbio.0040339.
4
Small RNA-Mediated Silencing of Transposons Is Initiated by Alternative Transposition in Maize.小 RNA 介导的转座子沉默是由玉米中的替代转座启动的。
Genetics. 2020 Jun;215(2):393-406. doi: 10.1534/genetics.120.303264. Epub 2020 Apr 21.
5
A position effect on the heritability of epigenetic silencing.对表观遗传沉默遗传性的位置效应。
PLoS Genet. 2008 Oct;4(10):e1000216. doi: 10.1371/journal.pgen.1000216. Epub 2008 Oct 10.
6
Initiation of silencing of maize MuDR/Mu transposable elements.玉米MuDR/Mu转座元件沉默的起始
Plant J. 2003 Mar;33(6):1013-25. doi: 10.1046/j.1365-313x.2003.01683.x.
7
The mop1 (mediator of paramutation1) mutant progressively reactivates one of the two genes encoded by the MuDR transposon in maize.mop1(副突变介导因子1)突变体逐渐重新激活玉米中由MuDR转座子编码的两个基因之一。
Genetics. 2006 Jan;172(1):579-92. doi: 10.1534/genetics.105.051383. Epub 2005 Oct 11.
8
Silencing of Elements in Maize Involves Distinct Populations of Small RNAs and Distinct Patterns of DNA Methylation.沉默元件涉及玉米中小 RNA 的不同群体和 DNA 甲基化的不同模式。
Genetics. 2020 Jun;215(2):379-391. doi: 10.1534/genetics.120.303033. Epub 2020 Mar 30.
9
Epigenetic silencing and unstable inheritance of MuDR activity monitored at four bz2-mu alleles in maize (Zea mays L.).在玉米(Zea mays L.)的四个bz2-mu等位基因处监测到的MuDR活性的表观遗传沉默和不稳定遗传。
Genes Genet Syst. 2007 Oct;82(5):387-401. doi: 10.1266/ggs.82.387.
10
Bombyx small RNAs: genomic defense system against transposons in the silkworm, Bombyx mori.家蚕小RNA:家蚕(Bombyx mori)中对抗转座子的基因组防御系统。
Insect Biochem Mol Biol. 2008 Dec;38(12):1058-65. doi: 10.1016/j.ibmb.2008.03.007. Epub 2008 Mar 27.

引用本文的文献

1
DNA Methylation and Alternative Splicing Safeguard Genome and Transcriptome After a Retrotransposition Burst in .DNA甲基化与可变剪接在[具体物种名称未给出]逆转录转座爆发后保护基因组和转录组
Int J Mol Sci. 2025 May 17;26(10):4816. doi: 10.3390/ijms26104816.
2
PTGS is dispensable for the initiation of epigenetic silencing of an active transposon in Arabidopsis.在拟南芥中,PTGS对于激活转座子的表观遗传沉默的起始并非必需。
EMBO Rep. 2024 Dec;25(12):5780-5809. doi: 10.1038/s44319-024-00304-5. Epub 2024 Nov 7.
3
Teosinte Pollen Drive guides maize diversification and domestication by RNAi.
玉米通过 RNAi 干扰受 teosinte 花粉驱动实现多样化和驯化。
Nature. 2024 Sep;633(8029):380-388. doi: 10.1038/s41586-024-07788-0. Epub 2024 Aug 7.
4
Blessing or curse: how the epigenetic resolution of host-transposable element conflicts shapes their evolutionary dynamics.祝福还是诅咒:宿主转座元件冲突的表观遗传解析如何塑造它们的进化动态。
Proc Biol Sci. 2024 Apr 10;291(2020):20232775. doi: 10.1098/rspb.2023.2775.
5
The Genomic Shock Hypothesis: Genetic and Epigenetic Alterations of Transposable Elements after Interspecific Hybridization in Plants.基因组冲击假说:植物种间杂交后转座元件的遗传和表观遗传改变
Epigenomes. 2023 Dec 27;8(1):2. doi: 10.3390/epigenomes8010002.
6
guides maize diversification and domestication by RNAi.通过RNA干扰引导玉米多样化和驯化。
bioRxiv. 2023 Nov 10:2023.07.12.548689. doi: 10.1101/2023.07.12.548689.
7
Arms race between anti-silencing and RdDM in noncoding regions of transposable elements.转座元件非编码区反沉默与 RdDM 之间的军备竞赛。
EMBO Rep. 2023 Aug 3;24(8):e56678. doi: 10.15252/embr.202256678. Epub 2023 Jun 5.
8
Epigenetic Regulation During Plant Development and the Capacity for Epigenetic Memory.植物发育过程中的表观遗传调控和表观遗传记忆能力。
Annu Rev Plant Biol. 2023 May 22;74:87-109. doi: 10.1146/annurev-arplant-070122-025047. Epub 2023 Feb 28.
9
Chromosome-scale assemblies of the male and female Populus euphratica genomes reveal the molecular basis of sex determination and sexual dimorphism.雌雄柽柳基因组的染色体水平组装揭示了性别决定和性二型性的分子基础。
Commun Biol. 2022 Nov 4;5(1):1186. doi: 10.1038/s42003-022-04145-7.
10
Rearranged Endogenized Plant Pararetroviruses as Evidence of Heritable RNA-based Immunity.重排的内源性植物拟反转录病毒作为可遗传的基于 RNA 的免疫证据。
Mol Biol Evol. 2023 Jan 4;40(1). doi: 10.1093/molbev/msac240.