Suppr超能文献

单个半柔性大分子的密集取向有序态:扩展系综蒙特卡罗模拟

Dense orientationally ordered states of a single semiflexible macromolecule: an expanded ensemble Monte Carlo simulation.

作者信息

Martemyanova J A, Stukan M R, Ivanov V A, Müller M, Paul W, Binder K

机构信息

Physics Department, Moscow State University, Russia.

出版信息

J Chem Phys. 2005 May 1;122(17):174907. doi: 10.1063/1.1888525.

Abstract

Using a coarse-grained model we perform a Monte Carlo simulation of the state behavior of an individual semiflexible macromolecule. Chains consisting of N = 256 and 512 monomer units have been investigated. A recently proposed enhanced sampling Monte Carlo technique for the bond fluctuation model in an expanded ensemble in four-dimensional coordinate space was applied. The algorithm allows one to accelerate the sampling of statistically independent three-dimensional conformations in a dense globular state. We found that the temperature of the intraglobular liquid-solid transition decreases with increasing chain stiffness. We have investigated the possible intraglobular orientationally ordered (i.e., liquid-crystalline) structures and obtained a diagram of states for chains consisting of N = 256 monomer units. This diagram contains regions of stability of coil, two spherical globules (liquid and solid), and rod-like globule conformations. Transitions between the globular states are rounded first-order ones since the states of liquid, solid, and cylinder-like globules do have different internal symmetry.

摘要

我们使用粗粒化模型对单个半柔性大分子的状态行为进行了蒙特卡罗模拟。研究了由N = 256和512个单体单元组成的链。应用了一种最近提出的用于四维坐标空间中扩展系综的键涨落模型的增强采样蒙特卡罗技术。该算法能够加速在致密球状状态下统计独立的三维构象的采样。我们发现,球内液-固转变温度随链刚度的增加而降低。我们研究了球内可能的取向有序(即液晶)结构,并得到了由N = 256个单体单元组成的链的状态图。该状态图包含了线圈、两个球形球粒(液体和固体)以及棒状球粒构象的稳定区域。球状状态之间的转变是圆滑的一级转变,因为液体、固体和圆柱状球粒的状态确实具有不同的内部对称性。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验