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舞毒蛾颗粒体病毒的特性及部分基因组序列分析

Characterization and partial genome sequence analysis of Clostera anachoreta granulovirus.

作者信息

Zhang X X, Liang Z P, Peng H Y, Zhang Z X, Tang X C, Liu T Q

机构信息

Laboratory for Biological Control, Wuhan Institute of Virology, Chinese Academy of Sciences, Xiaohongshan, Wuchang, Wuhan, Hubei 430071, PR China.

出版信息

Virus Res. 2005 Oct;113(1):36-43. doi: 10.1016/j.virusres.2005.04.013.

Abstract

The morphological and biological properties as well as partial genomic sequencing of a granulovirus isolated from Clostera anachoreta (Lepidoptera: Notodontidae), C. anachoreta granulovirus (ClanGV), were carried out. The ovoidal occlusion bodies were 337 nm x 170 nm in size, and each granule contained one single rod-shape virion, with a mean size of 250 nm x 46 nm. Granulin had a molecular weight of approximately 30 kDa. ClanGV genome size was estimated as 104.34 kb based on the restriction fragments. The restriction pattern of the ClanGV genome was different from other GVs. A restriction fragment genomic library of ClanGV genome was constructed. The library consisted of nine SalI fragments, seven HindIII fragments and seven EcoRI fragments. One 4.8 kb fragment of the genome, digested by SalI, was sequenced and analyzed. This region was composed of eight unknown ORFs, two baculoviruses homologous gene (vp1054 and lef10) and partial sequence of lef-8. The unknown ORFs included three unique to ClanGV, the other five ORFs were related to baculoviruses. The ORFs, located within this restriction fragment, were compared to homologues in other GVs. The results indicated that ClanGV, CpGV, ClGV, AoGV and PoGV had similar arrangement and orientation of the homologous ORFs. Phylogenetic analysis of VP1054 proteins from 20 baculoviruses indicated that ClanGV was more closely related to CpGV, ClGV, AoGV and PoGV than to other baculoviruses.

摘要

对从杨扇舟蛾(鳞翅目:舟蛾科)分离得到的一种颗粒体病毒——杨扇舟蛾颗粒体病毒(ClanGV)的形态学、生物学特性以及部分基因组测序进行了研究。其卵圆形包涵体大小为337 nm×170 nm,每个颗粒包含一个单一的杆状病毒粒子,平均大小为250 nm×46 nm。颗粒蛋白的分子量约为30 kDa。基于限制性片段估计ClanGV基因组大小为104.34 kb。ClanGV基因组的限制性图谱与其他颗粒体病毒不同。构建了ClanGV基因组的限制性片段基因组文库。该文库由9个SalI片段、7个HindIII片段和7个EcoRI片段组成。对经SalI酶切的基因组4.8 kb片段进行了测序和分析。该区域由8个未知开放阅读框、2个杆状病毒同源基因(vp1054和lef10)以及lef-8的部分序列组成。未知开放阅读框中,3个是ClanGV特有的,另外5个与杆状病毒相关。将该限制性片段内的开放阅读框与其他颗粒体病毒的同源物进行了比较。结果表明,ClanGV、CpGV、ClGV、AoGV和PoGV的同源开放阅读框具有相似的排列和方向。对20种杆状病毒的VP1054蛋白进行系统发育分析表明,ClanGV与CpGV、ClGV、AoGV和PoGV的亲缘关系比与其他杆状病毒更近。

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