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古菌外切体核心是一种具有三个催化亚基的六聚体环状结构。

The archaeal exosome core is a hexameric ring structure with three catalytic subunits.

作者信息

Lorentzen Esben, Walter Pamela, Fribourg Sebastien, Evguenieva-Hackenberg Elena, Klug Gabriele, Conti Elena

机构信息

European Molecular Biology Laboratory, Heidelberg, Germany.

出版信息

Nat Struct Mol Biol. 2005 Jul;12(7):575-81. doi: 10.1038/nsmb952. Epub 2005 Jun 12.

Abstract

The exosome is a 3' --> 5' exoribonuclease complex involved in RNA processing. We report the crystal structure of the RNase PH core complex of the Sulfolobus solfataricus exosome determined at a resolution of 2.8 A. The structure reveals a hexameric ring-like arrangement of three Rrp41-Rrp42 heterodimers, where both subunits adopt the RNase PH fold common to phosphorolytic exoribonucleases. Structure-guided mutagenesis reveals that the activity of the complex resides within the active sites of the Rrp41 subunits, all three of which face the same side of the hexameric structure. The Rrp42 subunit is inactive but contributes to the structuring of the Rrp41 active site. The high sequence similarity of this archaeal exosome to eukaryotic exosomes and its high structural similarity to the bacterial mRNA-degrading PNPase support a common basis for RNA-degrading machineries in all three domains of life.

摘要

外泌体是一种参与RNA加工的3'→5'核糖核酸外切酶复合物。我们报道了嗜热栖热菌外泌体的RNase PH核心复合物的晶体结构,分辨率为2.8埃。该结构揭示了三个Rrp41-Rrp42异源二聚体的六聚体环状排列,其中两个亚基都采用了磷酸解核糖核酸外切酶共有的RNase PH折叠。结构导向诱变表明,该复合物的活性位于Rrp41亚基的活性位点内,所有三个活性位点都面向六聚体结构的同一侧。Rrp42亚基无活性,但有助于Rrp41活性位点的结构形成。这种古菌外泌体与真核外泌体的高度序列相似性以及与细菌mRNA降解PNPase的高度结构相似性,支持了生命所有三个域中RNA降解机制的共同基础。

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