Hasegawa Koji, Noguchi Takumi
Laboratory for Photo-Biology (I), RIKEN Photodynamics Research Center, Aoba, Sendai, Miyagi 980-0845, Japan. kojihase@ postman.riken.go.jp
Biochemistry. 2005 Jun 21;44(24):8865-72. doi: 10.1021/bi050273c.
The primary donor chlorophyll (Chl) of photosystem II (PSII), P680, has an extremely high oxidation redox potential (E(ox)) of approximately 1.2 V, which is essential for photosynthetic water oxidation. The mechanism for achieving a high potential such as that of P680 has been one of the central questions in photosynthesis research. Here, we have examined the dielectric constant (epsilon) dependence of the E(ox) of monomer Chl using density functional theory calculations with the polarizable continuum model. The calculated E(ox) of a model Chl compound exhibited a sharp increase with a decrease in epsilon in the relatively low epsilon region (epsilon < 5). In contrast, in the higher-epsilon region, E(ox) was rather insensitive to epsilon and converged to a constant value at very high epsilon values. This tendency in the high-epsilon region explains the experimental E(ox) values of isolated Chl a that have been observed in a relatively narrow range of 0.74-0.93 V. The E(ox) of Chl in an ideal hydrophobic protein was estimated to be approximately 1.4 V at an epsilon value of 2. This value indicates that Chl in a hydrophobic environment originally has a high E(ox) that is sufficient for oxidizing water (E(ox) = 0.88 V at pH 6). On the basis of the reported X-ray crystallographic structures, the protein environment of P680 in PSII was estimated to be more hydrophobic than that of the primary donors in bacterial reaction centers. It is therefore suggested that the low-dielectric environment around P680 is one of the major factors in its very high E(ox), and thus, introducing nonpolar amino acids into the binding pocket of P680 was an important process in the evolution of PSII.
光系统II(PSII)的主要供体叶绿素(Chl)P680具有约1.2 V的极高氧化还原电位(E(ox)),这对于光合水氧化至关重要。实现如P680这般高电位的机制一直是光合作用研究的核心问题之一。在此,我们使用极化连续介质模型通过密度泛函理论计算研究了单体Chl的E(ox)对介电常数(ε)的依赖性。在相对低ε区域(ε < 5),模型Chl化合物的计算E(ox)随ε降低而急剧增加。相反,在较高ε区域,E(ox)对ε相当不敏感,并且在非常高的ε值时收敛到一个恒定值。在高ε区域的这种趋势解释了在0.74 - 0.93 V相对窄范围内观察到的分离Chl a的实验E(ox)值。在ε值为2时,理想疏水蛋白中Chl的E(ox)估计约为1.4 V。该值表明疏水环境中的Chl原本具有足以氧化水(在pH 6时E(ox) = 0.88 V)的高E(ox)。根据已报道的X射线晶体结构,PSII中P680的蛋白质环境估计比细菌反应中心中的主要供体更疏水。因此,有人提出P680周围的低介电环境是其极高E(ox)的主要因素之一,因此,将非极性氨基酸引入P680的结合口袋是PSII进化中的一个重要过程。