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本文引用的文献

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Nutritional control of gene expression: how mammalian cells respond to amino acid limitation.基因表达的营养调控:哺乳动物细胞如何应对氨基酸限制。
Annu Rev Nutr. 2005;25:59-85. doi: 10.1146/annurev.nutr.24.012003.132145.
2
Uncharged tRNA and sensing of amino acid deficiency in mammalian piriform cortex.无电荷转运RNA与哺乳动物梨状皮质中氨基酸缺乏的感知
Science. 2005 Mar 18;307(5716):1776-8. doi: 10.1126/science.1104882.
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Transcriptional control of cystine/glutamate transporter gene by amino acid deprivation.氨基酸剥夺对胱氨酸/谷氨酸转运体基因的转录调控
Biochem Biophys Res Commun. 2004 Dec 3;325(1):109-16. doi: 10.1016/j.bbrc.2004.10.009.
4
Amino acid deprivation induces the transcription rate of the human asparagine synthetase gene through a timed program of expression and promoter binding of nutrient-responsive basic region/leucine zipper transcription factors as well as localized histone acetylation.氨基酸剥夺通过营养响应性碱性区域/亮氨酸拉链转录因子的定时表达程序、启动子结合以及局部组蛋白乙酰化来诱导人天冬酰胺合成酶基因的转录速率。
J Biol Chem. 2004 Dec 3;279(49):50829-39. doi: 10.1074/jbc.M409173200. Epub 2004 Sep 22.
5
Diets deficient in indispensable amino acids rapidly decrease the concentration of the limiting amino acid in the anterior piriform cortex of rats.缺乏必需氨基酸的饮食会迅速降低大鼠梨状前皮质中限制氨基酸的浓度。
J Nutr. 2004 Sep;134(9):2365-71. doi: 10.1093/jn/134.9.2365.
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RNAPol-ChIP: a novel application of chromatin immunoprecipitation to the analysis of real-time gene transcription.RNA聚合酶染色质免疫沉淀法:染色质免疫沉淀在实时基因转录分析中的新应用
Nucleic Acids Res. 2004 Jun 24;32(11):e88. doi: 10.1093/nar/gnh091. Print 2004.
7
Human CCAAT/enhancer-binding protein beta gene expression is activated by endoplasmic reticulum stress through an unfolded protein response element downstream of the protein coding sequence.人CCAAT/增强子结合蛋白β基因的表达通过内质网应激,经由蛋白质编码序列下游的一个未折叠蛋白反应元件而被激活。
J Biol Chem. 2004 Jul 2;279(27):27948-56. doi: 10.1074/jbc.M313920200. Epub 2004 Apr 20.
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Proteins and amino acids in enteral nutrition.肠内营养中的蛋白质和氨基酸。
Curr Opin Clin Nutr Metab Care. 2004 Jan;7(1):79-87. doi: 10.1097/00075197-200401000-00013.
9
Activating transcription factor 3 is integral to the eukaryotic initiation factor 2 kinase stress response.激活转录因子3是真核起始因子2激酶应激反应所必需的。
Mol Cell Biol. 2004 Feb;24(3):1365-77. doi: 10.1128/MCB.24.3.1365-1377.2004.
10
Induction of p21 and p27 expression by amino acid deprivation of HepG2 human hepatoma cells involves mRNA stabilization.通过剥夺HepG2人肝癌细胞的氨基酸来诱导p21和p27表达涉及mRNA稳定性。
Biochem J. 2004 Apr 1;379(Pt 1):79-88. doi: 10.1042/BJ20031383.

氨基酸限制通过位于蛋白质编码序列下游的增强子活性诱导人C/EBPβ基因的转录。

Amino-acid limitation induces transcription from the human C/EBPbeta gene via an enhancer activity located downstream of the protein coding sequence.

作者信息

Chen Chin, Dudenhausen Elizabeth, Chen Hong, Pan Yuan-Xiang, Gjymishka Altin, Kilberg Michael S

机构信息

Department of Biochemistry and Molecular Biology, Genetics Institute, and Shands Cancer Center, University of Florida College of Medicine, Gainesville, FL 32610, USA.

出版信息

Biochem J. 2005 Nov 1;391(Pt 3):649-58. doi: 10.1042/BJ20050882.

DOI:10.1042/BJ20050882
PMID:16026328
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1276966/
Abstract

For animals, dietary protein is critical for the nutrition of the organism and, at the cellular level, protein nutrition translates into amino acid availability. Amino acid deprivation triggers the AAR (amino acid response) pathway, which causes enhanced transcription from specific target genes. The present results show that C/EBPbeta (CCAAT/enhancer-binding protein beta) mRNA and protein content were increased following the deprivation of HepG2 human hepatoma cells of a single amino acid. Although there was a modest increase in mRNA half-life following histidine limitation, the primary mechanism for the elevated steady-state mRNA was increased transcription. Transient transfection documented that C/EBPbeta genomic fragments containing the 8451 bp 5' upstream of the transcription start site did not contain amino-acid-responsive elements. However, deletion analysis of the genomic region located 3' downstream of the protein coding sequence revealed that a 93 bp fragment contained an amino-acid-responsive activity that functioned as an enhancer. Exogenous expression of ATF4 (activating transcription factor 4), known to activate other genes through amino acid response elements, caused increased transcription from reporter constructs containing the C/EBPbeta enhancer in cells maintained in complete amino acid medium. Chromatin immunoprecipitation demonstrated that RNA polymerase II is bound at the C/EBPbeta promoter and at the 93 bp regulatory region in vivo, whereas ATF4 binds to the enhancer region only. Immediately following amino acid removal, the kinetics of binding for ATF4, ATF3, and C/EBPbeta itself to the 93 bp regulatory region were similar to those observed for the amino-acid-responsive asparagine synthetase gene. Collectively the findings show that expression of C/EBPbeta, which contributes to the regulation of amino-acid-responsive genes, is itself controlled by amino acid availability through transcription.

摘要

对于动物而言,膳食蛋白质对机体营养至关重要,在细胞水平上,蛋白质营养转化为氨基酸的可利用性。氨基酸剥夺会触发氨基酸应答(AAR)途径,该途径会导致特定靶基因的转录增强。目前的结果表明,在人肝癌HepG2细胞缺乏单一氨基酸后,C/EBPβ(CCAAT/增强子结合蛋白β)的mRNA和蛋白质含量增加。尽管在组氨酸限制后mRNA半衰期有适度增加,但稳态mRNA升高的主要机制是转录增加。瞬时转染表明,包含转录起始位点上游8451 bp 5'的C/EBPβ基因组片段不包含氨基酸应答元件。然而,对位于蛋白质编码序列下游3'的基因组区域进行缺失分析发现,一个93 bp的片段具有作为增强子发挥作用的氨基酸应答活性。已知通过氨基酸应答元件激活其他基因的ATF4(激活转录因子4)的外源表达,在完全氨基酸培养基中培养的细胞中,导致含有C/EBPβ增强子的报告构建体的转录增加。染色质免疫沉淀表明,RNA聚合酶II在体内与C/EBPβ启动子和93 bp调控区域结合,而ATF4仅与增强子区域结合。在去除氨基酸后,ATF4、ATF3和C/EBPβ自身与93 bp调控区域结合的动力学与氨基酸应答的天冬酰胺合成酶基因所观察到的相似。这些发现共同表明,对氨基酸应答基因调控有贡献的C/EBPβ的表达本身通过转录受氨基酸可利用性的控制。