• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过残基特异性核磁共振扩散测量鉴定部分无序肽中间体

Identification of partially disordered peptide intermediates through residue-specific NMR diffusion measurements.

作者信息

Li Yingjie, Kim Seho, Brodsky Barbara, Baum Jean

机构信息

Department of Chemistry, Rutgers University, Piscataway, New Jersey 08854, USA.

出版信息

J Am Chem Soc. 2005 Aug 3;127(30):10490-1. doi: 10.1021/ja052801d.

DOI:10.1021/ja052801d
PMID:16045327
Abstract

It is technically challenging to detect low-population partially disordered species that are in equilibrium with the folded and unfolded states. Residue-specific translational diffusion experiments measured by pulsed field gradient NMR have been used to detect the presence, and define the conformation, of such equilibrium intermediates. The experiment is demonstrated for equilibrium solutions of related triple helical peptides that model a small region of type I collagen with and without a mutation known to cause osteogenesis imperfecta. The data show that residue-specific diffusion coefficients of an interconverting trimer to monomer system can allow discrimination between a simple two-state model and more complex multistate models involving partially disordered intermediates.

摘要

检测与折叠态和未折叠态处于平衡的低丰度部分无序物种在技术上具有挑战性。通过脉冲场梯度核磁共振测量的残基特异性平移扩散实验已被用于检测此类平衡中间体的存在并确定其构象。该实验在相关三螺旋肽的平衡溶液中得到了验证,这些肽模拟了I型胶原蛋白的一个小区域,有或没有已知会导致成骨不全的突变。数据表明,相互转化的三聚体到单体系统的残基特异性扩散系数可以区分简单的两态模型和涉及部分无序中间体的更复杂的多态模型。

相似文献

1
Identification of partially disordered peptide intermediates through residue-specific NMR diffusion measurements.通过残基特异性核磁共振扩散测量鉴定部分无序肽中间体
J Am Chem Soc. 2005 Aug 3;127(30):10490-1. doi: 10.1021/ja052801d.
2
NMR and CD spectroscopy show that imino acid restriction of the unfolded state leads to efficient folding.核磁共振(NMR)和圆二色光谱(CD)表明,未折叠状态下的亚氨基酸限制可导致高效折叠。
Biochemistry. 2003 Jul 29;42(29):8696-703. doi: 10.1021/bi034006n.
3
The folding mechanism of collagen-like model peptides explored through detailed molecular simulations.通过详细的分子模拟探索类胶原蛋白模型肽的折叠机制。
Protein Sci. 2006 Sep;15(9):2166-77. doi: 10.1110/ps.062124606.
4
Residue-specific real-time NMR diffusion experiments define the association states of proteins during folding.基于残基特异性的实时核磁共振扩散实验确定了蛋白质折叠过程中的缔合状态。
J Am Chem Soc. 2002 Jun 19;124(24):7156-62. doi: 10.1021/ja012699u.
5
Nuclear magnetic resonance shows asymmetric loss of triple helix in peptides modeling a collagen mutation in brittle bone disease.核磁共振显示,在模拟脆性骨病中胶原蛋白突变的肽段中,三螺旋结构出现不对称性缺失。
Biochemistry. 1998 Nov 3;37(44):15528-33. doi: 10.1021/bi981147u.
6
Direct NMR measurement of folding kinetics of a trimeric peptide.三聚体肽折叠动力学的直接核磁共振测量
Biochemistry. 1996 Apr 9;35(14):4306-13. doi: 10.1021/bi952270d.
7
Conformational preferences of a short Aib/Ala-based water-soluble peptide as a function of temperature.一种基于Aib/Ala的短水溶性肽的构象偏好随温度的变化情况。
Proteins. 2009 Jul;76(1):184-200. doi: 10.1002/prot.22337.
8
Template-assembled triple-helical peptide molecules: mimicry of collagen by molecular architecture and integrin-specific cell adhesion.模板组装三螺旋肽分子:通过分子结构模拟胶原蛋白及整合素特异性细胞黏附
Biochemistry. 2008 Jan 15;47(2):585-96. doi: 10.1021/bi702018v. Epub 2007 Dec 22.
9
NMR studies of partially folded molten-globule states.部分折叠的熔球态的核磁共振研究。
Methods Mol Biol. 2004;278:233-54. doi: 10.1385/1-59259-809-9:233.
10
Osteogenesis imperfecta model peptides: incorporation of residues replacing Gly within a triple helix achieved by renucleation and local flexibility.成骨不全症模型肽:通过再成核和局部灵活性实现取代三螺旋内甘氨酸残基的掺入。
Biophys J. 2011 Jul 20;101(2):449-58. doi: 10.1016/j.bpj.2011.06.017.

引用本文的文献

1
Collagen Mimetic Peptides.胶原模拟肽
Bioengineering (Basel). 2021 Jan 5;8(1):5. doi: 10.3390/bioengineering8010005.
2
Local amino acid sequence patterns dominate the heterogeneous phenotype for the collagen connective tissue disease Osteogenesis Imperfecta resulting from Gly mutations.局部氨基酸序列模式主导了由甘氨酸突变导致的胶原蛋白结缔组织疾病——成骨不全症的异质性表型。
J Struct Biol. 2015 Oct;192(1):127-37. doi: 10.1016/j.jsb.2015.05.002. Epub 2015 May 15.
3
The role of collagen charge clusters in the modulation of matrix metalloproteinase activity.
胶原电荷簇在基质金属蛋白酶活性调节中的作用。
J Biol Chem. 2014 Jan 24;289(4):1981-92. doi: 10.1074/jbc.M113.513408. Epub 2013 Dec 2.
4
Osteogenesis imperfecta model peptides: incorporation of residues replacing Gly within a triple helix achieved by renucleation and local flexibility.成骨不全症模型肽:通过再成核和局部灵活性实现取代三螺旋内甘氨酸残基的掺入。
Biophys J. 2011 Jul 20;101(2):449-58. doi: 10.1016/j.bpj.2011.06.017.
5
Methods to determine slow diffusion coefficients of biomolecules: applications to Engrailed 2, a partially disordered protein.测定生物分子慢扩散系数的方法:在部分无序蛋白 Engrailed 2 中的应用。
J Biomol NMR. 2011 Jul;50(3):209-18. doi: 10.1007/s10858-011-9510-8. Epub 2011 May 21.
6
A combinatorial NMR and EPR approach for evaluating the structural ensemble of partially folded proteins.组合 NMR 和 EPR 方法评估部分折叠蛋白质的结构构象。
J Am Chem Soc. 2010 Jun 30;132(25):8657-68. doi: 10.1021/ja100646t.
7
Structural reorganization of alpha-synuclein at low pH observed by NMR and REMD simulations.通过核磁共振(NMR)和复制交换分子动力学(REMD)模拟观察到低pH值下α-突触核蛋白的结构重组。
J Mol Biol. 2009 Aug 28;391(4):784-96. doi: 10.1016/j.jmb.2009.06.063. Epub 2009 Jul 1.