南极海洋细菌胞外多糖的化学特性

Chemical characterization of exopolysaccharides from Antarctic marine bacteria.

作者信息

Nichols Carol Mancuso, Lardière Sandrine Garon, Bowman John P, Nichols Peter D, A E Gibson John, Guézennec Jean

机构信息

School of Agricultural Science, University of Tasmania, Hobart 7000, Tasmania, Australia.

出版信息

Microb Ecol. 2005 May;49(4):578-89. doi: 10.1007/s00248-004-0093-8. Epub 2005 Jul 29.

Abstract

Exopolysaccharides (EPS) may have an important role in the Antarctic marine environment, possibly acting as ligands for trace metal nutrients such as iron or providing cryoprotection for growth at low temperature and high salinity. Ten bacterial strains, isolated from Southern Ocean particulate material or from sea ice, were characterized. Whole cell fatty acid profiles and 16S rRNA gene sequences showed that the isolates included representatives of the genera Pseudoalteromonas, Shewanella, Polaribacter, and Flavobacterium as well as one strain, which constituted a new bacterial genus in the family Flavobacteriaceae. The isolates are, therefore, members of the "Gammaproteobacteria" and Cytophaga-Flexibacter-Bacteroides, the taxonomic groups that have been shown to dominate polar sea ice and seawater microbial communities. Exopolysaccharides produced by Antarctic isolates were characterized. Chemical composition and molecular weight data revealed that these EPS were very diverse, even among six closely related Pseudoalteromonas isolates. Most of the EPS contained charged uronic acid residues; several also contained sulfate groups. Some strain produced unusually large polymers (molecular weight up to 5.7 MDa) including one strain in which EPS synthesis is stimulated by low temperature. This study represents a first step in the understanding of the role of bacterial EPS in the Antarctic marine environment.

摘要

胞外多糖(EPS)可能在南极海洋环境中发挥重要作用,它可能作为铁等微量金属营养物质的配体,或者为在低温和高盐环境下的生长提供低温保护。对从南大洋颗粒物质或海冰中分离出的10株细菌菌株进行了表征。全细胞脂肪酸谱和16S rRNA基因序列表明,这些分离株包括假交替单胞菌属、希瓦氏菌属、极地杆菌属和黄杆菌属的代表菌株,以及一株属于黄杆菌科新细菌属的菌株。因此,这些分离株属于“γ-变形菌纲”和噬纤维菌-屈挠杆菌-拟杆菌类群,这些分类群已被证明在极地海冰和海水微生物群落中占主导地位。对南极分离株产生的胞外多糖进行了表征。化学成分和分子量数据显示,这些EPS差异很大,即使在6株密切相关的假交替单胞菌分离株中也是如此。大多数EPS含有带电荷的糖醛酸残基;有几种还含有硫酸基团。一些菌株产生了异常大的聚合物(分子量高达5.7 MDa),其中包括一株其EPS合成受低温刺激的菌株。这项研究是了解细菌EPS在南极海洋环境中作用的第一步。

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