Bowman J P, McCammon S A, Nichols D S, Skerratt J H, Rea S M, Nichols P D, McMeekin T A
Antarctic CRC, University of Tasmania, Hobart, Australia.
Int J Syst Bacteriol. 1997 Oct;47(4):1040-7. doi: 10.1099/00207713-47-4-1040.
A polyphasic taxonomic study was performed to characterize dissimilatory iron-reducing strains mostly isolated from Antarctic sea ice. The strains were isolated from samples of congelated (land-fast) sea ice, grease ice, and ice algal biomass collected from the coastal areas of the Vestfold Hills in eastern Antarctica (68 degrees S 78 degrees E). The strains were facultatively anaerobic, motile, and rod shaped, were capable of anaerobic growth either by fermentation of carbohydrates or by anaerobic respiration, and utilized a variety of electron acceptors, including nitrate, ferric compounds, and trimethylamine N-oxide. A phylogenetic analysis performed with 16S rRNA sequences showed that the isolates formed two groups representing novel lineages in the genus Shewanella. The first novel group included seawater-requiring, psychrophilic, chitinolytic strains which had DNA G + C contents of 48 mol%. The members of the second strain group were psychrotrophic and did not require seawater but could tolerate up to 9% NaCl. The strains of this group were also unable to degrade polysaccharides but could utilize a number of monosaccharides and disaccharides and had G + C contents of 40 to 43 mol%. The whole-cell-derived fatty acid profiles of the sea ice isolates were found to be similar to the profiles obtained for other Shewanella species. The omega-3 polyunsaturated fatty acid eicosapentaenoic acid (EPA) (20:5 omega 3) was detected in all of the sea ice isolates at levels ranging from 2 to 16% of the total fatty acids. EPA was also found at high levels in Shewanella hanedai (19 to 22%) and Shewanella benthica (16 to 18%) but was absent in Shewanella alga and Shewanella putrefaciens. On the basis of polyphasic taxonomic data, the Antarctic iron-reducing strains are placed in two new species, Shewanella frigidimarina sp. nov. (type strain, ACAM 591) and Shewanella gelidimarina sp. nov. (type strain, ACAM 456).
进行了多相分类研究,以表征主要从南极海冰中分离出的异化铁还原菌株。这些菌株是从南极东部韦斯特福尔丘陵沿海地区(南纬68度,东经78度)采集的冻结(固定)海冰、油脂冰和冰藻生物质样本中分离出来的。这些菌株为兼性厌氧、具运动性且呈杆状,能够通过碳水化合物发酵或厌氧呼吸进行厌氧生长,并利用多种电子受体,包括硝酸盐、铁化合物和三甲胺N-氧化物。用16S rRNA序列进行的系统发育分析表明,这些分离株形成了两个代表希瓦氏菌属新谱系的组。第一个新组包括需要海水、嗜冷、能分解几丁质的菌株,其DNA G + C含量为48摩尔%。第二组菌株为耐冷菌,不需要海水,但能耐受高达9%的氯化钠。该组菌株也不能降解多糖,但能利用多种单糖和双糖,其G + C含量为40至43摩尔%。发现海冰分离株的全细胞脂肪酸谱与其他希瓦氏菌属物种的谱相似。在所有海冰分离株中均检测到ω-3多不饱和脂肪酸二十碳五烯酸(EPA)(20:5ω3),其含量占总脂肪酸的2%至16%。在羽田希瓦氏菌(19%至22%)和底栖希瓦氏菌(16%至18%)中也发现了高水平的EPA,但在海藻希瓦氏菌和腐败希瓦氏菌中未检测到。根据多相分类数据,南极铁还原菌株被归入两个新物种,即嗜冷希瓦氏菌(Shewanella frigidimarina sp. nov.)(模式菌株,ACAM 591)和冰栖希瓦氏菌(Shewanella gelidimarina sp. nov.)(模式菌株,ACAM 456)。