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钙动力学的晶格模型。

Lattice model for calcium dynamics.

作者信息

Guisoni Nara, de Oliveira Mario José

机构信息

Instituto de Física, Universidade de São Paulo, C.P. 66318, Cep 05315-970, São Paulo, SP, Brazil.

出版信息

Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Jun;71(6 Pt 1):061910. doi: 10.1103/PhysRevE.71.061910. Epub 2005 Jun 22.

Abstract

We present a simplified lattice model to study calcium dynamics in the endoplasmic reticulum membrane. Calcium channels and calcium ions are placed in two interpenetrating square lattices which are connected in two ways: (i) via calcium release and (ii) because transitions between channel states are calcium dependent. The opening or closing of a channel is a stochastic process controlled by two functions which depend on the calcium density on the channel neighborhood. The model is studied through mean field calculations and simulations. We show that the critical behavior of the model changes drastically depending on the opening/closing functions. For certain choices of these functions, all channels are closed at very low and high calcium densities and the model presents one absorbing state.

摘要

我们提出了一个简化的晶格模型来研究内质网膜中的钙动力学。钙通道和钙离子置于两个相互贯穿的方形晶格中,这两个晶格通过两种方式相连:(i)通过钙释放,以及(ii)因为通道状态之间的转变依赖于钙。通道的打开或关闭是一个随机过程,由两个依赖于通道邻域钙密度的函数控制。通过平均场计算和模拟对该模型进行了研究。我们表明,模型的临界行为根据打开/关闭函数的不同而发生显著变化。对于这些函数的某些选择,在非常低和高的钙密度下所有通道都是关闭的,并且该模型呈现出一个吸收态。

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