Delgado-Buscalioni Rafael, Coveney Peter V, Riley Graham D, Ford Rupert W
Centre for Computational Science, Department of Chemistry, University College London, UK.
Philos Trans A Math Phys Eng Sci. 2005 Aug 15;363(1833):1975-85. doi: 10.1098/rsta.2005.1623.
Over the past three years we have been developing a new approach for the modelling and simulation of complex fluids. This approach is based on a multiscale hybrid scheme, in which two or more contiguous subdomains are dynamically coupled together. One subdomain is described by molecular dynamics while the other is described by continuum fluid dynamics; such coupled models are of considerable importance for the study of fluid dynamics problems in which only a restricted aspect requires a fully molecular representation. Our model is representative of the generic set of coupled models whose algorithmic structure presents interesting opportunities for deployment on a range of architectures including computational grids. Here we describe the implementation of our HybridMD code within a coupling framework that facilitates flexible deployment on such architectures.