Smith P J, Popelier P L A
School of Chemistry, Faraday Building, Sackville Site, University of Manchester, Manchester, M60 1QD, Great Britain.
Org Biomol Chem. 2005 Sep 21;3(18):3399-407. doi: 10.1039/b507024d. Epub 2005 Aug 17.
A technique called quantum topological molecular similarity (QTMS) was recently proposed [J. Chem. Inf. Comput. Sci., 2001, 41, 764] in order to construct a variety of medicinal, ecological and physical organic QSAR/QSPRs, based on modern ab initio wave functions of geometry optimised molecules, in combination with quantum chemical topology (QCT). The current abundance of computing power can be utilised to inject realistic descriptors into QSAR/QSPRs. In previous work [J. Chem. Soc., Perkin Trans. 2, 2002, 1231] it was proven that a set of Hammett constants (sigma(p), sigma(m), sigma(I) and sigma(p)0) for a sizeable set of mono- and polysubstituted carboxylic acids can be replaced by QCT bond descriptors. Using QTMS and proper statistical validation we examined seven data sets in total. The first three sets (para-substituted phenols (sigma-), substituted toluenes (sigma+) and bromophenethylamines (sigma+)) corroborate that a wider class of Hammett constants can also be replaced by QCT descriptors. A fourth set (benzyl radicals) focuses on non-Hammett behaviour being superimposed on Hammett behaviour. QCT descriptors selectively correlate with Hammett behaviour. The QTMS analysis of the last three sets (toxicity of benzyl alcohols, chromatographic capacity factors of chalcones and herbicidal activity of 5-chloro-2,3-dicyanopyrazines) screens for false positives. This test is successfully passed in that QCT descriptors fail when lipophilicity/hydrophobicity is in charge. Hence, overall, the discriminatory capacity of QCT descriptors is established, in detecting Hammett behaviour and specifically replacing the Hammett constants by more modern and non-empirical descriptors.
最近提出了一种称为量子拓扑分子相似性(QTMS)的技术[《化学信息与计算机科学杂志》,2001年,41卷,764页],以便基于几何优化分子的现代从头算波函数,并结合量子化学拓扑(QCT),构建各种医学、生态和物理有机定量构效关系/定量结构-性质关系(QSAR/QSPRs)。当前丰富的计算能力可用于将实际描述符注入到QSAR/QSPRs中。在先前的工作[《化学学会杂志,珀金 Transactions 2》,2002年,1231页]中已证明,相当数量的单取代和多取代羧酸的一组哈米特常数(σ(p)、σ(m)、σ(I)和σ(p)0)可以被QCT键描述符取代。使用QTMS和适当的统计验证,我们总共检查了七个数据集。前三组(对取代苯酚(σ-)、取代甲苯(σ+)和溴苯乙胺(σ+))证实,更广泛类别的哈米特常数也可以被QCT描述符取代。第四组(苄基自由基)关注叠加在哈米特行为上的非哈米特行为。QCT描述符与哈米特行为选择性相关。对最后三组(苄醇的毒性、查耳酮的色谱容量因子和5-氯-2,3-二氰基吡嗪的除草活性)的QTMS分析筛选出假阳性。该测试成功通过,因为当亲脂性/疏水性起主导作用时,QCT描述符失效。因此,总体而言,确立了QCT描述符在检测哈米特行为以及特别是用更现代和非经验性描述符取代哈米特常数方面的区分能力。