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Selecting transpositions using phage P1 headful packaging: new markerless transposons for functionally mapping long-range regulatory sequences in bacterial artificial chromosomes and P1-derived artificial chromosomes.利用噬菌体P1 头部填充包装法选择转座:用于在细菌人工染色体和P1 衍生人工染色体中对长程调控序列进行功能定位的新型无标记转座子。
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SMAD-mediated modulation of YY1 activity regulates the BMP response and cardiac-specific expression of a GATA4/5/6-dependent chick Nkx2.5 enhancer.SMAD介导的YY1活性调节对BMP反应及GATA4/5/6依赖性鸡Nkx2.5增强子的心脏特异性表达的调控。
Development. 2004 Oct;131(19):4709-23. doi: 10.1242/dev.01344. Epub 2004 Aug 25.
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Mef2c is a direct transcriptional target of ISL1 and GATA factors in the anterior heart field during mouse embryonic development.在小鼠胚胎发育过程中,Mef2c是前心脏区域中ISL1和GATA因子的直接转录靶点。
Development. 2004 Aug;131(16):3931-42. doi: 10.1242/dev.01256. Epub 2004 Jul 14.
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Nkx2-5 pathways and congenital heart disease; loss of ventricular myocyte lineage specification leads to progressive cardiomyopathy and complete heart block.Nkx2-5信号通路与先天性心脏病;心室肌细胞谱系特异性丧失导致进行性心肌病和完全性心脏传导阻滞。
Cell. 2004 Apr 30;117(3):373-86. doi: 10.1016/s0092-8674(04)00405-2.
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The cardiac determination factor, Nkx2-5, is activated by mutual cofactors GATA-4 and Smad1/4 via a novel upstream enhancer.心脏决定因子Nkx2-5通过一个新的上游增强子被共同辅助因子GATA-4和Smad1/4共同激活。
J Biol Chem. 2004 Mar 12;279(11):10659-69. doi: 10.1074/jbc.M301648200. Epub 2003 Dec 8.
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An essential role of Bmp4 in the atrioventricular septation of the mouse heart.Bmp4在小鼠心脏房室间隔形成中的重要作用。
Genes Dev. 2003 Oct 1;17(19):2362-7. doi: 10.1101/gad.1124803. Epub 2003 Sep 15.
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Expression of Nkx2-5-GFP bacterial artificial chromosome transgenic mice closely resembles endogenous Nkx2-5 gene activity.
Genesis. 2003 Apr;35(4):220-6. doi: 10.1002/gene.10181.
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Deciphering the transcriptional histone acetylation code for a human gene.破译人类基因的转录组蛋白乙酰化密码。
Cell. 2002 Nov 1;111(3):381-92. doi: 10.1016/s0092-8674(02)01077-2.
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Dissecting long-range transcriptional mechanisms by chromatin immunoprecipitation.通过染色质免疫沉淀剖析远程转录机制。
Methods. 2002 Jan;26(1):27-36. doi: 10.1016/S1046-2023(02)00005-1.
10
Cardiac-specific activity of an Nkx2-5 enhancer requires an evolutionarily conserved Smad binding site.Nkx2-5增强子的心脏特异性活性需要一个进化上保守的Smad结合位点。
Dev Biol. 2002 Apr 15;244(2):257-66. doi: 10.1006/dbio.2002.0603.

由对诺金敏感的增强子激活的复杂心脏Nkx2-5基因表达,随后是特定腔室模块。

Complex cardiac Nkx2-5 gene expression activated by noggin-sensitive enhancers followed by chamber-specific modules.

作者信息

Chi Xuan, Chatterjee Pradeep K, Wilson Willie, Zhang Shu-Xing, Demayo Franco J, Schwartz Robert J

机构信息

Graduate Program in Cardiovascular Sciences and Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX 77030, USA.

出版信息

Proc Natl Acad Sci U S A. 2005 Sep 20;102(38):13490-5. doi: 10.1073/pnas.0504295102. Epub 2005 Sep 6.

DOI:10.1073/pnas.0504295102
PMID:16150722
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1224629/
Abstract

We previously reported that an Nkx2-5-GFP bacterial artificial chromosome in transgenic mice recapitulated the endogenous gene activity in the heart. Here, we identified three additional previously uncharacterized distal enhancer modules of Nkx2-5: UH6, which directed transgene expression in the right ventricle, interventricular septum, and atrial ventricular canal; UH5, which directed expression in both atria; and UH4, which directed transgene expression in tongue muscle. Nkx2-5 enhancers drive cardiogenic gene activity from the earliest progenitors to the late-stage embryonic heart, reside within its 27 kb of 5' flanking sequences, organized in a tandem array. Nkx2-5 enhancers involved with stomach-, tongue-, and chamber-restricted expression displayed lacZ transgene activity and chromatin histone acetylation patterns consistent with tissue-specific expression. An examination of Nkx2-5 gene activity in murine embryonic stem cells converted to beating embryoid bodies showed that only the proximal active region 2 and GATA-Smad enhancers were chromatin-remodeled. Chromatin remodeling of active region 2 and GATA-Smad enhancers were blunted by noggin coexpression, which indicated dependence on bone morphogenetic protein signaling for their chromatin activation during activation of Nkx2-5 expression.

摘要

我们之前报道过,转基因小鼠中的一个Nkx2-5-GFP细菌人工染色体重现了心脏中内源性基因的活性。在此,我们鉴定出了Nkx2-5另外三个之前未被描述的远端增强子模块:UH6,其指导转基因在右心室、室间隔和房室管中表达;UH5,其指导转基因在两个心房中表达;以及UH4,其指导转基因在舌肌中表达。Nkx2-5增强子驱动从最早的祖细胞到胚胎晚期心脏的心脏发生基因活性,位于其27 kb的5'侧翼序列内,呈串联排列。与胃、舌和腔室限制性表达相关的Nkx2-5增强子显示出与组织特异性表达一致的lacZ转基因活性和染色质组蛋白乙酰化模式。对转化为跳动类胚体的小鼠胚胎干细胞中Nkx2-5基因活性的检查表明,只有近端活性区域2和GATA-Smad增强子发生了染色质重塑。活性区域2和GATA-Smad增强子的染色质重塑被noggin共表达减弱,这表明在Nkx2-5表达激活过程中,它们的染色质激活依赖于骨形态发生蛋白信号传导。