Choe Yoong-Kee, Nagase Shigeru
Research Institute for Computational Sciences, National Institute of Advanced Industrial Science and Technology, Center-2, Umezono 1-1-1, Tsukuba 305-8578, Japan.
J Comput Chem. 2005 Nov 30;26(15):1600-11. doi: 10.1002/jcc.20302.
The effect of axial ligands on the reactivity of high-valent iron(IV) oxo-porphyrins (Compound I) was investigated using the B3LYP hybrid density functional method. We studied alkane hydroxylation using four models: Compound I with thiolate, imidazole, phenolate, and chloride anions as axial ligands. The first three ligands were employed as models for cysteinate, histidine, and tyrosinate, respectively. Our calculations show that anionic ligands and neutral ligands favor different electronic states for stationary points in the reaction coordinate, and the calculated energy barrier and energy of several reaction intermediates show similar values. A remarkable effect of axial ligands was found in the final product release step. Our calculations show that the thiolate ligand weakens a bond between heme and an alcohol. In contrast, the imidazole ligand significantly increases the interaction between heme and an alcohol, which causes the catalytic cycle to be less efficient.
使用B3LYP杂化密度泛函方法研究了轴向配体对高价铁(IV)氧代卟啉(化合物I)反应活性的影响。我们使用四种模型研究了烷烃羟基化反应:以硫醇盐、咪唑、酚盐和氯离子作为轴向配体的化合物I。前三种配体分别用作半胱氨酸盐、组氨酸和酪氨酸盐的模型。我们的计算表明,阴离子配体和中性配体有利于反应坐标中驻点的不同电子态,并且计算得到的几个反应中间体的能垒和能量显示出相似的值。在最终产物释放步骤中发现了轴向配体的显著影响。我们的计算表明,硫醇盐配体削弱了血红素与醇之间的键。相比之下,咪唑配体显著增加了血红素与醇之间的相互作用,这导致催化循环效率降低。