• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

低分子拥挤条件下天然脱辅基肌红蛋白的体外表达与表征

In vitro expression and characterization of native apomyoglobin under low molecular crowding conditions.

作者信息

Bakke Courtney K, Jungbauer Lisa M, Cavagnero Silvia

机构信息

Department of Chemistry, University of Wisconsin-Madison, 1101 University Ave., Madison, WI 53706, USA.

出版信息

Protein Expr Purif. 2006 Feb;45(2):381-92. doi: 10.1016/j.pep.2005.08.001. Epub 2005 Aug 25.

DOI:10.1016/j.pep.2005.08.001
PMID:16169747
Abstract

The labile nature of membranes and organelles poses serious challenges to in situ biomolecule characterization in intact cells. Cell-free in vitro systems provide an alternative promising medium for the expression and characterization of protein conformation and function in a biochemical context that bears several similarities to the cellular environment. In addition, cell-free transcription-translation has recently emerged as a convenient method for protein selective isotope labeling, providing significant advantages for detailed NMR analysis. We report the cell-free expression of the model protein apomyoglobin (apoMb) in an Escherichia coli cell-free system and the effect of polyethylene glycol (PEG) on the expression yields. In contrast with in vivo protein production under control of the strong T7 promoter, apoMb is expressed in vitro in 100% soluble form. In-gel tryptic digestion followed by mass spectrometry were performed to confirm the protein identity. In order to probe the conformation of the newly expressed protein and investigate the feasibility of in situ structural analysis, high resolution protein characterization was carried out by 2D NMR spectroscopy. In vitro apoMb expression in a PEG-free environment is a convenient method for the production of soluble native-like protein under conditions amenable to selective isotopic labeling. Yields can be easily scaled-up by dialysis-assisted cell-free expression.

摘要

膜和细胞器的不稳定性质给完整细胞中的原位生物分子表征带来了严峻挑战。无细胞体外系统为在与细胞环境有若干相似之处的生化背景下表达和表征蛋白质构象及功能提供了一种有前景的替代介质。此外,无细胞转录-翻译最近已成为蛋白质选择性同位素标记的一种便捷方法,为详细的核磁共振分析提供了显著优势。我们报道了模型蛋白脱辅基肌红蛋白(apoMb)在大肠杆菌无细胞系统中的无细胞表达以及聚乙二醇(PEG)对表达产量的影响。与在强T7启动子控制下的体内蛋白质生产不同,apoMb在体外以100%可溶形式表达。进行了凝胶内胰蛋白酶消化随后进行质谱分析以确认蛋白质身份。为了探测新表达蛋白质的构象并研究原位结构分析的可行性,通过二维核磁共振光谱进行了高分辨率蛋白质表征。在无PEG环境中体外表达apoMb是在适合选择性同位素标记的条件下生产可溶性天然样蛋白质的便捷方法。产量可通过透析辅助的无细胞表达轻松扩大。

相似文献

1
In vitro expression and characterization of native apomyoglobin under low molecular crowding conditions.低分子拥挤条件下天然脱辅基肌红蛋白的体外表达与表征
Protein Expr Purif. 2006 Feb;45(2):381-92. doi: 10.1016/j.pep.2005.08.001. Epub 2005 Aug 25.
2
Characterization of protein expression and folding in cell-free systems by maldi-tof mass spectrometry.
Anal Chem. 2006 Apr 15;78(8):2841-52. doi: 10.1021/ac052247q.
3
Experimental and computational analysis of translation products in apomyoglobin expression.脱辅基肌红蛋白表达中翻译产物的实验与计算分析
J Mol Biol. 2006 Apr 7;357(4):1121-43. doi: 10.1016/j.jmb.2006.01.012. Epub 2006 Jan 30.
4
Diffusive motions control the folding and unfolding kinetics of the apomyoglobin pH 4 molten globule intermediate.扩散运动控制着脱辅基肌红蛋白pH 4熔融球状体中间体的折叠和去折叠动力学。
Biochemistry. 2007 Apr 10;46(14):4379-89. doi: 10.1021/bi602574x. Epub 2007 Mar 17.
5
Defining the interacting regions between apomyoglobin and lipid membrane by hydrogen/deuterium exchange coupled to mass spectrometry.通过氢/氘交换结合质谱法确定脱辅基肌红蛋白与脂质膜之间的相互作用区域。
J Mol Biol. 2007 Apr 27;368(2):464-72. doi: 10.1016/j.jmb.2007.02.014. Epub 2007 Feb 13.
6
Probing the conformational state of apomyoglobin by limited proteolysis.通过有限蛋白酶解探究脱辅基肌红蛋白的构象状态。
J Mol Biol. 1997 Feb 21;266(2):223-30. doi: 10.1006/jmbi.1996.0787.
7
Computer simulations of the refolding of sperm whale apomyoglobin from high-temperature denaturated state.抹香鲸脱辅基肌红蛋白从高温变性状态重新折叠的计算机模拟。
J Phys Chem B. 2008 Aug 7;112(31):9501-6. doi: 10.1021/jp804300w. Epub 2008 Jul 11.
8
Fibrillogenesis of apomyoglobin facilitated by aggregation sequence of yeast Sup35 in various regions.酵母 Sup35 在不同区域的聚集序列促进了脱辅基肌红蛋白的原纤维形成。
FEBS Lett. 2005 Feb 28;579(6):1503-8. doi: 10.1016/j.febslet.2005.01.059.
9
Crowding and hydration effects on protein conformation: a study with sol-gel encapsulated proteins.拥挤和水合作用对蛋白质构象的影响:溶胶-凝胶包封蛋白质的研究
J Mol Biol. 2001 Dec 7;314(4):911-22. doi: 10.1006/jmbi.2001.5166.
10
Tryptophanyl substitutions in apomyoglobin affect conformation and dynamic properties of AGH subdomain.脱辅基肌红蛋白中的色氨酸取代影响AGH亚结构域的构象和动力学性质。
Biopolymers. 2003 Dec;70(4):649-54. doi: 10.1002/bip.10503.

引用本文的文献

1
Nascent chains derived from a foldable protein sequence interact with specific ribosomal surface sites near the exit tunnel.新生肽链来源于可折叠的蛋白质序列,并与出口隧道附近特定的核糖体表面位点相互作用。
Sci Rep. 2024 May 29;14(1):12324. doi: 10.1038/s41598-024-61274-1.
2
Mapping Protein-Protein Interactions at Birth: Single-Particle Cryo-EM Analysis of a Ribosome-Nascent Globin Complex.出生时蛋白质-蛋白质相互作用的图谱绘制:核糖体-新生珠蛋白复合物的单颗粒冷冻电镜分析
ACS Cent Sci. 2024 Feb 1;10(2):385-401. doi: 10.1021/acscentsci.3c00777. eCollection 2024 Feb 28.
3
Non-Native Structures of Apomyoglobin and Apoleghemoglobin in Folding Intermediates Related to the Protein Misfolding.
与蛋白质错误折叠相关的折叠中间体中脱辅肌红蛋白和脱辅血蓝蛋白的非天然结构
Molecules. 2023 May 8;28(9):3970. doi: 10.3390/molecules28093970.
4
Critical Beginnings: Selective Tuning of Solubility and Structural Accuracy of Newly Synthesized Proteins by the Hsp70 Chaperone System.关键起点:通过热休克蛋白 70 伴侣系统选择性调整新合成蛋白质的溶解性和结构准确性。
J Phys Chem B. 2023 May 11;127(18):3990-4014. doi: 10.1021/acs.jpcb.2c08485. Epub 2023 May 2.
5
Selective Isotope Labeling and LC-Photo-CIDNP Enable NMR Spectroscopy at Low-Nanomolar Concentration.选择性同位素标记和 LC-光 CIDNP 使 NMR 光谱在低纳摩尔浓度下成为可能。
J Am Chem Soc. 2022 Jul 6;144(26):11608-11619. doi: 10.1021/jacs.2c01809. Epub 2022 Jun 14.
6
Key reaction components affect the kinetics and performance robustness of cell-free protein synthesis reactions.关键反应组分影响无细胞蛋白质合成反应的动力学和性能稳健性。
Comput Struct Biotechnol J. 2021 Dec 13;20:218-229. doi: 10.1016/j.csbj.2021.12.013. eCollection 2022.
7
Fluorescence Anisotropy Decays and Microscale-Volume Viscometry Reveal the Compaction of Ribosome-Bound Nascent Proteins.荧光各向异性衰减和微体积黏度计揭示核糖体结合的新生蛋白质的紧缩。
J Phys Chem B. 2021 Jun 24;125(24):6543-6558. doi: 10.1021/acs.jpcb.1c04473. Epub 2021 Jun 10.
8
Macromolecular crowding effects on transcription and translation are regulated by free magnesium ion.大分子拥挤对转录和翻译的影响受游离镁离子的调节。
Biotechnol Appl Biochem. 2020 Jan;67(1):117-122. doi: 10.1002/bab.1827. Epub 2019 Oct 15.
9
Implications of macromolecular crowding and reducing conditions for in vitro ribosome construction.大分子拥挤和还原条件对体外核糖体构建的影响
Nucleic Acids Res. 2015 May 19;43(9):4774-84. doi: 10.1093/nar/gkv329. Epub 2015 Apr 20.
10
Cell-free protein expression under macromolecular crowding conditions.无细胞蛋白在大分子拥挤环境下的表达。
PLoS One. 2011;6(12):e28707. doi: 10.1371/journal.pone.0028707. Epub 2011 Dec 8.