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基于线粒体和核基因序列推断韩国两种近缘拟地甲属物种(鞘翅目:步甲科)的物种状态和系统地理学

Species status and phylogeography of two closely related Coptolabrus species (Coleoptera: Carabidae) in South Korea inferred from mitochondrial and nuclear gene sequences.

作者信息

Zhang A B, Kubota K, Takami Y, Kim J L, Kim J K, Sota T

机构信息

Department of Zoology, Graduate School of Science, Kyoto University, Sakyo, Kyoto 606-8502, Japan.

出版信息

Mol Ecol. 2005 Oct;14(12):3823-41. doi: 10.1111/j.1365-294X.2005.02705.x.

Abstract

We investigated the species status and intraspecific phylogeography in South Korea of two ground beetle species, Coptolabrus jankowskii and Coptolabrus smaragdinus (Coleoptera: Carabidae), using statistical parsimony networks and nested clade analyses based on sequences from the mitochondrial cytochrome oxidase subunit I (COI) and nuclear phosphoenolpyruvate carboxykinase (PepCK) and wingless (Wg) genes. Although traditional parsimony tree construction generally failed to resolve interspecific relationships and construct biologically meaningful genealogies, analysis using statistical parsimony networks yielded statistically significant inter- and intraspecific genealogical structures. We found that although these two species represent a notable case of trans-species polymorphisms in both mitochondrial and nuclear gene sequences, their status as separate species was evidenced by the nonrandom association between species and nested clades at various nesting levels. The exceptional occurrence of shared identical or very similar COI sequences was considered to be the result of introgressive hybridization. In addition, range expansion and fragmentation events across the Korean Peninsula and adjacent islands were inferred from nested clade phylogeographical analyses. The COI gene revealed the geographical divergence of major eastern and western clades and historical biogeographical events within each major clade, whereas the nuclear PepCK gene, which did not reveal corresponding east-west clades, indicated past fragmentation and range expansion across wide areas that may have been the result of older biogeographical events. Thus, phylogeographical inferences drawn from analyses of mitochondrial and nuclear genes can reveal different and potentially complementary information about phylogeographical processes.

摘要

我们基于线粒体细胞色素氧化酶亚基I(COI)、核磷酸烯醇式丙酮酸羧激酶(PepCK)和无翅(Wg)基因的序列,运用统计简约网络和嵌套分支分析,研究了韩国两种步甲科昆虫——詹氏梳爪步甲(Coptolabrus jankowskii)和绿梳爪步甲(Coptolabrus smaragdinus)的物种地位及种内系统地理学。尽管传统简约树构建通常无法解析种间关系并构建具有生物学意义的谱系,但使用统计简约网络进行分析产生了具有统计学意义的种间和种内谱系结构。我们发现,虽然这两个物种在线粒体和核基因序列中均表现出明显的跨物种多态性情况,但它们作为独立物种的地位通过不同嵌套水平上物种与嵌套分支之间的非随机关联得到了证明。共享相同或非常相似的COI序列的异常出现被认为是渐渗杂交的结果。此外,通过嵌套分支系统地理学分析推断出了朝鲜半岛及邻近岛屿上的范围扩张和片段化事件。COI基因揭示了主要东部和西部支系的地理分化以及每个主要支系内的历史生物地理学事件,而未揭示相应东西部支系的核PepCK基因则表明过去在广大区域内发生了片段化和范围扩张,这可能是更古老生物地理学事件的结果。因此,对线粒体和核基因分析得出的系统地理学推断可以揭示有关系统地理过程的不同且可能互补的信息。

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