Matsumoto Rena, Akama Kuniko, Rakwal Randeep, Iwahashi Hitoshi
Graduate School of Science and Technology, Chiba University, Inage, Chiba 263-8522, Japan.
BMC Genomics. 2005 Oct 7;6:141. doi: 10.1186/1471-2164-6-141.
A yeast strain lacking the two genes SSA1 and SSA2, which encode cytosolic molecular chaperones, acquires thermotolerance as well as the mild heat-shocked wild-type yeast strain. We investigated the genomic response at the level of mRNA expression to the deletion of SSA1/2 in comparison with the mild heat-shocked wild-type using cDNA microarray.
Yeast cDNA microarray analysis revealed that genes involved in the stress response, including molecular chaperones, were up-regulated in a similar manner in both the ssa1/2 deletion mutant and the mild heat-shocked wild-type. Genes involved in protein synthesis were up-regulated in the ssa1/2 deletion mutant, but were markedly suppressed in the mild heat-shocked wild-type. The genes involved in ubiquitin-proteasome protein degradation were also up-regulated in the ssa1/2 deletion mutant, whereas the unfolded protein response (UPR) genes were highly expressed in the mild heat-shocked wild-type. RT-PCR confirmed that the genes regulating protein synthesis and cytosolic protein degradation were up-regulated in the ssa1/2 deletion mutant. At the translational level, more ubiquitinated proteins and proteasomes were detected in the ssa1/2 deletion mutant, than in the wild-type, confirming that ubiquitin-proteasome protein degradation was up-regulated by the deletion of SSA1/2.
These results suggest that the mechanism for rescue of denatured proteins in the ssa1/2 deletion mutant is different from that in the mild heat-shocked wild-type: Activated protein synthesis in the ssa1/2 deletion mutant supplies a deficiency of proteins by their degradation, whereas mild heat-shock induces UPR.
一种缺少编码胞质分子伴侣的SSA1和SSA2这两个基因的酵母菌株,获得了耐热性,与轻度热激的野生型酵母菌株一样。我们使用cDNA微阵列,研究了与轻度热激的野生型相比,SSA1/2缺失在mRNA表达水平上的基因组反应。
酵母cDNA微阵列分析显示,在ssa1/2缺失突变体和轻度热激的野生型中,包括分子伴侣在内的参与应激反应的基因以相似的方式上调。参与蛋白质合成的基因在ssa1/2缺失突变体中上调,但在轻度热激的野生型中被显著抑制。参与泛素-蛋白酶体蛋白降解的基因在ssa1/2缺失突变体中也上调,而未折叠蛋白反应(UPR)基因在轻度热激的野生型中高表达。RT-PCR证实,调节蛋白质合成和胞质蛋白降解的基因在ssa1/2缺失突变体中上调。在翻译水平上,在ssa1/2缺失突变体中检测到比野生型更多的泛素化蛋白和蛋白酶体,证实了泛素-蛋白酶体蛋白降解通过SSA1/2的缺失而上调。
这些结果表明,ssa1/2缺失突变体中变性蛋白的拯救机制与轻度热激的野生型不同:ssa1/2缺失突变体中激活的蛋白质合成通过其降解来补充蛋白质的不足,而轻度热激诱导UPR。