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使用固定化底物的微量滴定管基于生物测定法筛选降解二噁英的微生物。

Bioassay-based screening of microorganisms that degrade dioxin using substrate-immobilized microtubes.

作者信息

Shitamura Akihiro, Kasai Ayumi, Hiramatsu Nobuhiko, Hayakawa Kunihiro, Yao Jian, Kitamura Masanori

机构信息

Department of Molecular Signaling, Interdisciplinary Graduate School of Medicine and Engineering, University of Yamanashi, Tamaho, Japan.

出版信息

Anal Biochem. 2005 Dec 1;347(1):135-43. doi: 10.1016/j.ab.2005.09.015. Epub 2005 Oct 3.

Abstract

In the current study, we attempted to develop a method for bioassay-based screening of microorganisms that degrade dioxin. However, a crucial problem encountered was that the standard dioxin 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) added to bacterial medium immediately disappeared from the liquid phase due to its adsorption onto polypropylene (PP) tubes. Among other aromatic hydrocarbons, adsorption onto PP tubes was also observed in beta-naphthoflavone but not in benzo[a]pyrene. Adsorption of TCDD was observed not only onto PP tubes but also onto polystyrene, glass, and PP tubes with low affinity for DNA or protein. Silanization was not effective at preventing adsorption of TCDD. TCDD immobilized onto PP tubes was recovered by organic solvents, including ethanol, methanol, and dimethyl sulfoxide (DMSO). The elution efficiency of the immobilized TCDD by DMSO was approximately 85%. Based on these findings, screening of bacteria that degrade dioxin was attempted as follows. First, TCDD was immobilized onto PP tubes. Second, bacterial suspension was added to the tubes and incubated for biodegradation of TCDD. Third, remaining, immobilized TCDD was eluted by DMSO and subjected to a reporter bioassay to evaluate the level of TCDD. Using this method, we demonstrated successful screening of bacteria that have the potential for degradation of dioxin.

摘要

在当前的研究中,我们试图开发一种基于生物测定法筛选降解二噁英微生物的方法。然而,遇到的一个关键问题是,添加到细菌培养基中的标准二噁英2,3,7,8-四氯二苯并对二噁英(TCDD)由于吸附在聚丙烯(PP)管上而立即从液相中消失。在其他芳烃中,β-萘黄酮也观察到吸附在PP管上,但苯并[a]芘没有。不仅在PP管上观察到TCDD的吸附,在对DNA或蛋白质亲和力低的聚苯乙烯、玻璃和PP管上也观察到吸附。硅烷化对防止TCDD的吸附无效。固定在PP管上的TCDD可通过包括乙醇、甲醇和二甲基亚砜(DMSO)在内的有机溶剂回收。DMSO对固定化TCDD的洗脱效率约为85%。基于这些发现,降解二噁英细菌的筛选如下进行。首先,将TCDD固定在PP管上。其次,将细菌悬浮液加入管中并孵育以进行TCDD的生物降解。第三,用DMSO洗脱剩余的固定化TCDD,并进行报告基因生物测定以评估TCDD的水平。使用这种方法,我们成功地筛选出了具有降解二噁英潜力的细菌。

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