Provorov N A
Zh Obshch Biol. 2005 Sep-Oct;66(5):371-88.
Molecular mechanisms of the bacteria evolution are addressed in the context of the theory of symbiogenic origin of eukaryotic cells. In the evolution of symbiotic bacteria two strategies are implemented: (a) combinative, resulted in the formation of symbiotic (sym) gene systems from the genes previously involved in the autonomous life (facultative and ecologically obligatory symbioses); (b) reductive, related to the loss of genes for the autonomous life (genetically obligatory symbioses). Both strategies are based on the increase in genomic plasticity leading: (a) during combinative evolution--to the segregation of sym gene systems into the special plasmids or "islands" (the genome size and complexity increase); (b) during the reductive evolution--to the losses of many metabolic pathways (genome size decreases). These processes are continued during the evolution of mitochondria, hydrogenosomes and plastids in which many genes for the transcription and translation were lost, while the genomes of organelles and nuclei recombined. These reorganizations are related to the peculiarities of the bacteria population dynamics within the symbiotic systems. The bacteria which combine the abilities for symbiotic and autonomous lifestyles are characterized by ecotypic polymorphism (stable coexistence of symbiotic and asymbiotic genotypes). A key role in their evolution is implemented by horizontal transfer of sym genes that in combination with different forms of natural selection (individual, frequency-dependent and group selection) are responsible for the combinative evolution of bacteria genome. In the populations of obligatory symbionts, the genetic drift and group selection dominate that ensure bacteria genome reduction, loss of their biological identity and transformation into organelles.
细菌进化的分子机制是在真核细胞共生起源理论的背景下进行探讨的。在共生细菌的进化过程中,实施了两种策略:(a)组合性策略,导致由先前参与自主生活的基因(兼性和生态上必需的共生关系)形成共生(sym)基因系统;(b)还原性策略,与自主生活基因的丧失有关(遗传上必需的共生关系)。这两种策略都基于基因组可塑性的增加,导致:(a)在组合进化过程中,共生基因系统分离到特殊的质粒或“岛”中(基因组大小和复杂性增加);(b)在还原性进化过程中,许多代谢途径丧失(基因组大小减小)。这些过程在线粒体、氢化酶体和质体的进化过程中持续进行,其中许多转录和翻译基因丢失,而细胞器和细胞核的基因组发生重组。这些重组与共生系统内细菌种群动态的特殊性有关。结合共生和自主生活方式能力的细菌具有生态型多态性(共生和非共生基因型的稳定共存)。共生基因的水平转移在它们的进化中起关键作用,共生基因与不同形式的自然选择(个体选择、频率依赖性选择和群体选择)相结合,负责细菌基因组的组合进化。在专性共生体的种群中,遗传漂变和群体选择占主导地位,这确保了细菌基因组的减少、其生物学特性的丧失以及向细胞器的转变。