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Calibrating a coalescent simulation of human genome sequence variation.
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Accounting for long-range correlations in genome-wide simulations of large cohorts.
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3
Temporal challenges in detecting balancing selection from population genomic data.
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The effects of demography and long-term selection on the accuracy of genomic prediction with sequence data.
Genetics. 2014 Dec;198(4):1671-84. doi: 10.1534/genetics.114.168344. Epub 2014 Sep 18.
6
GENOMEPOP: a program to simulate genomes in populations.
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7
Linkage disequilibrium in humans: models and data.
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Singapore Genome Variation Project: a haplotype map of three Southeast Asian populations.
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Human genome sequence variation and the influence of gene history, mutation and recombination.
Nat Genet. 2002 Sep;32(1):135-42. doi: 10.1038/ng947. Epub 2002 Aug 5.

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Robust inference with GhostKnockoffs in genome-wide association studies.
Res Sq. 2025 May 5:rs.3.rs-6396196. doi: 10.21203/rs.3.rs-6396196/v1.
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A Minimax Optimal Ridge-Type Set Test for Global Hypothesis with Applications in Whole Genome Sequencing Association Studies.
J Am Stat Assoc. 2022;117(538):897-908. doi: 10.1080/01621459.2020.1831926. Epub 2020 Nov 20.
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Ensemble methods for testing a global null.
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A statistical framework for multi-trait rare variant analysis in large-scale whole-genome sequencing studies.
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Gene-based association tests in family samples using GWAS summary statistics.
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本文引用的文献

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Searching for signals of evolutionary selection in 168 genes related to immune function.
Hum Genet. 2006 Mar;119(1-2):92-102. doi: 10.1007/s00439-005-0090-0. Epub 2005 Dec 14.
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Population history and natural selection shape patterns of genetic variation in 132 genes.
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Evidence for substantial fine-scale variation in recombination rates across the human genome.
Nat Genet. 2004 Jul;36(7):700-6. doi: 10.1038/ng1376. Epub 2004 Jun 6.
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The fine-scale structure of recombination rate variation in the human genome.
Science. 2004 Apr 23;304(5670):581-4. doi: 10.1126/science.1092500.
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Selection versus demography: a multilocus investigation of the domestication process in maize.
Mol Biol Evol. 2004 Jul;21(7):1214-25. doi: 10.1093/molbev/msh102. Epub 2004 Mar 10.
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Population-genetic basis of haplotype blocks in the 5q31 region.
Am J Hum Genet. 2004 Jan;74(1):40-9. doi: 10.1086/381040. Epub 2003 Dec 17.
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Assessing the performance of the haplotype block model of linkage disequilibrium.
Am J Hum Genet. 2003 Sep;73(3):502-15. doi: 10.1086/378099. Epub 2003 Aug 11.
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Haplotype blocks and linkage disequilibrium in the human genome.
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