Ghosh Zhumur, Chakrabarti Jayprokas, Mallick Bibekanand, Das Smarajit, Sahoo Satyabrata, Sethi Harmeet Singh
Computational Biology Group, Theory Department, Indian Association for the Cultivation of Science, Calcutta 700032, India.
Biochem Biophys Res Commun. 2006 Jan 6;339(1):37-40. doi: 10.1016/j.bbrc.2005.10.183. Epub 2005 Nov 8.
Transfer-RNA genes in archaea often have introns intervening between exon sequences. The structural motif at the boundary between exon and intron is the bulge-helix-bulge. Computational investigations of these boundary structures in Haloarcula marismortui lead us to propose that tRNA-isoleucine and tRNA-tryptophan genes are co-located. Precise in silico identification of the splice-sites on the bulges at the exon-intron boundaries lead us to infer that a single intron-containing composite tRNA-gene can give rise to more than one gene product.
古菌中的转运RNA基因通常在外显子序列之间含有内含子。外显子和内含子之间边界处的结构基序是凸起-螺旋-凸起。对嗜盐嗜碱菌中这些边界结构的计算研究使我们提出,异亮氨酸转运RNA基因和色氨酸转运RNA基因位于同一位置。通过计算机精确识别外显子-内含子边界处凸起上的剪接位点,我们推断一个含单个内含子的复合转运RNA基因可以产生不止一种基因产物。