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丁酰胆碱酯酶催化可卡因水解的催化机制和能垒。

Catalytic mechanism and energy barriers for butyrylcholinesterase-catalyzed hydrolysis of cocaine.

作者信息

Zhan Chang-Guo, Gao Daquan

机构信息

Department of Pharmaceutical Sciences, College of Pharmacy, University of Kentucky, Lexington, Kentucky 40536, USA.

出版信息

Biophys J. 2005 Dec;89(6):3863-72. doi: 10.1529/biophysj.105.070276.

Abstract

The geometries of the transition states, intermediates, and prereactive enzyme-substrate complex and the corresponding energy barriers have been determined by performing hybrid quantum mechanical/molecular mechanical (QM/MM) calculations on butyrylcholinesterase (BChE)-catalyzed hydrolysis of (-)- and (+)-cocaine. The energy barriers were evaluated by performing QM/MM calculations with the QM method at the MP2/6-31+G* level and the MM method using the AMBER force field. These calculations allow us to account for the protein environmental effects on the transition states and energy barriers of these enzymatic reactions, showing remarkable effects of the protein environment on intermolecular hydrogen bonding (with an oxyanion hole), which is crucial for the transition state stabilization and, therefore, on the energy barriers. The calculated energy barriers are consistent with available experimental kinetic data. The highest barrier calculated for BChE-catalyzed hydrolysis of (-)- and (+)-cocaine is associated with the third reaction step, but the energy barrier calculated for the first step is close to the highest and is so sensitive to the protein environment that the first reaction step can be rate determining for (-)-cocaine hydrolysis catalyzed by a BChE mutant. The computational results provide valuable insights into future design of BChE mutants with a higher catalytic activity for (-)-cocaine.

摘要

通过对丁酰胆碱酯酶(BChE)催化的(-)-和(+)-可卡因水解反应进行量子力学/分子力学(QM/MM)混合计算,确定了过渡态、中间体和反应前酶-底物复合物的几何结构以及相应的能垒。能垒通过使用MP2/6-31+G*水平的QM方法和使用AMBER力场的MM方法进行QM/MM计算来评估。这些计算使我们能够考虑蛋白质环境对这些酶促反应的过渡态和能垒的影响,显示出蛋白质环境对分子间氢键(与氧阴离子洞)有显著影响,这对过渡态稳定至关重要,因此也对能垒有影响。计算得到的能垒与现有的实验动力学数据一致。BChE催化(-)-和(+)-可卡因水解计算得到的最高能垒与第三步反应相关,但第一步计算得到的能垒接近最高值,并且对蛋白质环境非常敏感,以至于第一步反应对于BChE突变体催化的(-)-可卡因水解可能是速率决定步骤。计算结果为未来设计对(-)-可卡因具有更高催化活性的BChE突变体提供了有价值的见解。

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