McNulty Brian C, Young Gregory B, Pielak Gary J
Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
J Mol Biol. 2006 Feb 3;355(5):893-7. doi: 10.1016/j.jmb.2005.11.033. Epub 2005 Dec 1.
The natively disordered protein alpha-synuclein is the primary component of Lewy bodies, the cellular hallmark of Parkinson's disease. Most studies of this protein are performed in dilute solution, but its biologically relevant role is performed in the crowded environment inside cells. We addressed the effects of macromolecular crowding on alpha-synuclein by combining NMR data acquired in living Escherichia coli with in vitro NMR data. The crowded environment in the E.coli periplasm prevents a conformational change that is detected at 35 degrees C in dilute solution. This change is associated with an increase in hydrodynamic radius and the formation of secondary structure in the N-terminal 100 amino acid residues. By preventing this temperature-induced conformational change, crowding in the E.coli periplasm stabilizes the disordered monomer. We obtain the same stabilization in vitro upon crowding alpha-synuclein with 300 g/l of bovine serum albumin, indicating that crowding alone is sufficient to stabilize the disordered, monomeric protein. Two disease-associated variants (A30P and A53T) behave in the same way in both dilute solution and in the E.coli periplasm. These data reveal the importance of approaching the effects of macromolecular crowding on a case-by-case basis. Additionally, our work shows that discrete structured protein conformations may not be achieved by alpha-synuclein inside cells, implicating the commonly overlooked aspect of macromolecular crowding as a possible factor in the etiology of Parkinson's disease.
天然无序蛋白α-突触核蛋白是路易小体的主要成分,路易小体是帕金森病的细胞标志。对这种蛋白的大多数研究是在稀溶液中进行的,但其生物学相关作用是在细胞内拥挤的环境中发挥的。我们通过将在活的大肠杆菌中获得的核磁共振(NMR)数据与体外NMR数据相结合,研究了大分子拥挤对α-突触核蛋白的影响。大肠杆菌周质中的拥挤环境阻止了在稀溶液中35℃时检测到的构象变化。这种变化与流体动力学半径的增加以及N端100个氨基酸残基二级结构的形成有关。通过阻止这种温度诱导的构象变化,大肠杆菌周质中的拥挤作用稳定了无序单体。当用300 g/l牛血清白蛋白使α-突触核蛋白拥挤时,我们在体外也获得了同样的稳定效果,这表明仅拥挤作用就足以稳定无序的单体蛋白。两种与疾病相关的变体(A30P和A53T)在稀溶液和大肠杆菌周质中的行为方式相同。这些数据揭示了逐案研究大分子拥挤效应的重要性。此外,我们的工作表明,α-突触核蛋白在细胞内可能无法形成离散的结构化蛋白构象,这意味着大分子拥挤这一常被忽视的方面可能是帕金森病病因学中的一个因素。