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评估微生物群落周转率异质性的方法。

Method for Assessing Heterogeneity in Turnover Rates within Microbial Communities.

机构信息

Department of Oceanography, University of Hawaii, Honolulu, Hawaii, 96822, and Hawaii Institute of Marine Biology, Coconut Island, Kaneohe, Hawaii, 96744.

出版信息

Appl Environ Microbiol. 1986 Oct;52(4):866-74. doi: 10.1128/aem.52.4.866-874.1986.

DOI:10.1128/aem.52.4.866-874.1986
PMID:16347178
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC239129/
Abstract

A method is presented for determining both the average turnover rate and the standard deviation of the average turnover rate of the adenine nucleotide (AN) pool within a population of microorganisms. The method requires the calculation of the initial slope and curvature of a plot of AN specific activity versus time following the introduction of [H]adenine. An analysis of noise-corrupted data indicated that the method is capable of detecting a lack of uniformity in the turnover rate when the coefficient of variation of the turnover rate exceeds 39%. An analysis of field data revealed a significant lack of uniformity in the turnover rates of microbial communities in a marine sediment sample and freshwater pond but no significant nonuniformity in the turnover rates of microbial communities in a seawater sample and in a second freshwater pond. Although the method has been applied only to the analysis of AN turnover rates, it is applicable to any intracellular pool for which a suitable radioactive precursor exists.

摘要

提出了一种方法,用于确定微生物群体中腺嘌呤核苷酸(AN)池的平均周转率和平均周转率的标准偏差。该方法需要在引入[H]腺嘌呤后,根据 AN 比活度与时间的关系图计算初始斜率和曲率。对噪声污染数据的分析表明,当周转率的变异系数超过 39%时,该方法能够检测到周转率的不均匀性。对现场数据的分析表明,在海洋沉积物样品和淡水池塘中的微生物群落的周转率存在显著的不均匀性,但在海水样品和第二个淡水池塘中的微生物群落的周转率没有显著的不均匀性。尽管该方法仅应用于 AN 周转率的分析,但它适用于任何存在合适放射性前体的细胞内池。

相似文献

1
Method for Assessing Heterogeneity in Turnover Rates within Microbial Communities.评估微生物群落周转率异质性的方法。
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2
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本文引用的文献

1
Analysis of hydrothermal vent-associated symbionts by ribosomal RNA sequences.通过核糖体RNA序列分析与热液喷口相关的共生体。
Science. 1984 Apr 27;224(4647):409-11. doi: 10.1126/science.224.4647.409.
2
Measurement of Microbial Nucleic Acid Synthesis and Specific Growth Rate by PO(4) and [H]Adenine: Field Comparison.通过 PO(4) 和 [H]腺嘌呤测量微生物核酸合成和比生长速率:现场比较。
Appl Environ Microbiol. 1985 Sep;50(3):706-9. doi: 10.1128/aem.50.3.706-709.1985.
3
Heterotrophic activity throughout a vertical profile of seawater and sediment in halifax harbor, Canada.加拿大哈利法克斯港海水和沉积物垂直剖面的异养活性。
Appl Environ Microbiol. 1983 Jun;45(6):1753-60. doi: 10.1128/aem.45.6.1753-1760.1983.
4
Simultaneous rates of ribonucleic Acid and deoxyribonucleic Acid syntheses for estimating growth and cell division of aquatic microbial communities.同时测定 RNA 和 DNA 合成速率以估计水生微生物群落的生长和细胞分裂。
Appl Environ Microbiol. 1981 Nov;42(5):802-10. doi: 10.1128/aem.42.5.802-810.1981.
5
Bacterioplankton secondary production estimates for coastal waters of british columbia, antarctica, and california.不列颠哥伦比亚省、南极洲和加利福尼亚州沿海海域的细菌浮游生物次级生产力估计。
Appl Environ Microbiol. 1980 Jun;39(6):1085-95. doi: 10.1128/aem.39.6.1085-1095.1980.
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Measurement of microbial activity and growth in the ocean by rates of stable ribonucleic Acid synthesis.通过稳定的核糖核酸合成速率测量海洋中的微生物活性和生长。
Appl Environ Microbiol. 1979 Nov;38(5):850-60. doi: 10.1128/aem.38.5.850-860.1979.
7
Frequency of dividing cells, a new approach to the determination of bacterial growth rates in aquatic environments.细胞分裂频率:一种测定水生环境中细菌生长率的新方法。
Appl Environ Microbiol. 1979 May;37(5):805-12. doi: 10.1128/aem.37.5.805-812.1979.
8
Adenine nucleotide concentrations and turnover rates. Their correlation with biological activity in bacteria and yeast.腺嘌呤核苷酸浓度与周转率。它们与细菌和酵母生物活性的相关性。
Adv Microb Physiol. 1977;15:253-306. doi: 10.1016/s0065-2911(08)60318-5.