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果蝇变态发育开始时对20-羟基蜕皮酮的基因组反应。

The genomic response to 20-hydroxyecdysone at the onset of Drosophila metamorphosis.

作者信息

Beckstead Robert B, Lam Geanette, Thummel Carl S

机构信息

Department of Human Genetics, Howard Hughes Medical Institute, University of Utah School of Medicine, Salt Lake City, UT 84112-5331, USA.

出版信息

Genome Biol. 2005;6(12):R99. doi: 10.1186/gb-2005-6-12-r99. Epub 2005 Nov 21.

Abstract

BACKGROUND

The steroid hormone 20-hydroxyecdysone (20E) triggers the major developmental transitions in Drosophila, including molting and metamorphosis, and provides a model system for defining the developmental and molecular mechanisms of steroid signaling. 20E acts via a heterodimer of two nuclear receptors, the ecdysone receptor (EcR) and Ultraspiracle, to directly regulate target gene transcription.

RESULTS

Here we identify the genomic transcriptional response to 20E as well as those genes that are dependent on EcR for their proper regulation. We show that genes regulated by 20E, and dependent on EcR, account for many transcripts that are significantly up- or downregulated at puparium formation. We provide evidence that 20E and EcR participate in the regulation of genes involved in metabolism, stress, and immunity at the onset of metamorphosis. We also present an initial characterization of a 20E primary-response regulatory gene identified in this study, brain tumor (brat), showing that brat mutations lead to defects during metamorphosis and changes in the expression of key 20E-regulated genes.

CONCLUSION

This study provides a genome-wide basis for understanding how 20E and its receptor control metamorphosis, as well as a foundation for functional genomic analysis of key regulatory genes in the 20E signaling pathway during insect development.

摘要

背景

类固醇激素20-羟基蜕皮酮(20E)引发果蝇的主要发育转变,包括蜕皮和变态,并为定义类固醇信号传导的发育和分子机制提供了一个模型系统。20E通过两种核受体——蜕皮激素受体(EcR)和超气门蛋白的异二聚体发挥作用,直接调节靶基因转录。

结果

在此,我们确定了对20E的基因组转录反应以及那些其正常调控依赖于EcR的基因。我们表明,受20E调控且依赖于EcR的基因,涵盖了许多在蛹形成时显著上调或下调的转录本。我们提供证据表明,20E和EcR在变态开始时参与对涉及代谢、应激和免疫的基因的调控。我们还对本研究中鉴定出的一个20E初级反应调控基因——脑肿瘤(brat)进行了初步表征,表明brat突变会导致变态期间的缺陷以及关键的20E调控基因表达的变化。

结论

本研究为理解20E及其受体如何控制变态提供了全基因组基础,也为昆虫发育过程中20E信号通路关键调控基因的功能基因组分析奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b8be/1414087/e2077f0b2ca3/gb-2005-6-12-r99-1.jpg

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