Suppr超能文献

血红蛋白变构动力学:倒数第二个酪氨酸氢键的作用

Dynamics of allostery in hemoglobin: roles of the penultimate tyrosine H bonds.

作者信息

Kneipp Janina, Balakrishnan Gurusamy, Chen Ruopian, Shen Tong-Jian, Sahu Sarata C, Ho Nancy T, Giovannelli Janel L, Simplaceanu Virgil, Ho Chien, Spiro Thomas G

机构信息

Department of Chemistry, Princeton University, NJ 08544, USA.

出版信息

J Mol Biol. 2006 Feb 17;356(2):335-53. doi: 10.1016/j.jmb.2005.11.006. Epub 2005 Nov 22.

Abstract

The tyrosine residues adjacent to the C termini of the hemoglobin (Hb) subunits, alphaY140 and betaY145, are expected to play important structural roles, because the C termini are the loci of T-state quaternary salt-bridges, and because the tyrosine side-chains bridge the H and F helices via H bonds to the alphaV93 and betaV98 carbonyl groups. These roles have been investigated via measurements of oxygen binding, (1)H NMR spectra, resonance Raman (RR) spectra, and time-resolved resonance Raman (TR(3)) spectra on site mutants in which the Hcdots, three dots, centeredF H bonds are eliminated by replacing the tyrosine residues with phenylalanine. The TR(3) spectra confirm the hypothesis, based on TR(3) studies of wild-type Hb, that the Hcdots, three dots, centeredF H bonds break and then re-form during the sub-microsecond phase of the R-T quaternary transition. The TR(3) spectra support the inference from other mutational studies that the alphabeta dimers act as single dynamic units in this early phase, motions of the E and F helices being coupled tightly across the dimer interface. Formation of T quaternary contacts occurs at about the same rate in the mutants as in HbA. However, these contacts are weakened substantially by the Y/F substitutions. Equilibrium perturbations are apparent also, especially for the alpha-subunits, in which relaxation of the Fe-His bond, strengthening of the Acdots, three dots, centeredE interhelical H bond, and weakening of the "switch" quaternary contact in deoxyHb are all apparent. Structural effects are less marked for the beta-chain Y/F replacement, but the Bohr effect is reduced by 25%, indicating that the salt-bridge and H bond interactions of the adjacent C terminus are loosened. The alpha-chain replacement reduces the Bohr effect much more, consistent with the global perturbations detected by the structure probes.

摘要

血红蛋白(Hb)亚基αY140和βY145的C末端附近的酪氨酸残基,预计发挥重要的结构作用,因为C末端是T态四级盐桥的位点,并且酪氨酸侧链通过与αV93和βV98羰基的氢键桥接H和F螺旋。通过对位点突变体进行氧结合测量、(1)H NMR光谱、共振拉曼(RR)光谱和时间分辨共振拉曼(TR(3))光谱,研究了这些作用。在这些位点突变体中,通过用苯丙氨酸取代酪氨酸残基消除了中心F的H键。TR(3)光谱证实了基于野生型Hb的TR(3)研究得出的假设,即在R-T四级转变的亚微秒阶段,中心F的H键断裂然后重新形成。TR(3)光谱支持其他突变研究的推断,即在这个早期阶段,αβ二聚体作为单个动态单元起作用,E和F螺旋的运动在二聚体界面紧密耦合。T四级接触的形成在突变体中的速率与在HbA中的大致相同。然而,这些接触因Y/F取代而显著减弱。平衡扰动也很明显,特别是对于α亚基,其中Fe-His键的松弛、中心E螺旋间H键的加强以及脱氧Hb中“开关”四级接触的减弱都很明显。β链Y/F取代的结构效应不太明显,但玻尔效应降低了25%,表明相邻C末端的盐桥和氢键相互作用被放松。α链取代对玻尔效应的降低更多,这与结构探针检测到的全局扰动一致。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验