Ramos José Esio Bessa, de Vries Renko, Ruggiero Neto João
Department of Physics, IBILCE UNESP, Universidade Estadual Paulista, R. Cristóvão Colombo 2265, 15054-000 São José do Rio Preto SP, Brazil.
J Phys Chem B. 2005 Dec 15;109(49):23661-5. doi: 10.1021/jp0527103.
Psi-condensation of DNA fragments of about 4 kbp was induced by poly(ethylene glycol) (PEG), with degrees of polymerization ranging from 45 to 182, and univalent salt (NaCl). Using circular dichroism spectroscopy, we were able to accurately determine the critical amount of PEG needed to induce condensation, as a function of the NaCl concentration. A significant dependence on the PEG degree of polymerization was found. Phase boundaries determined for the multimolecular condensation were very similar to those observed previously for the monomolecular collapse, with two asymptotic regimes at low and high salt concentrations. We analyze our data using a theoretical model that properly takes into account both the polyelectrolyte nature of the DNA and the liquid crystallinity of the condensed phase. The model assumes that all PEG is excluded from the condensates and shows reentrant decondensation only at low salt. We also systematically study reentrant decondensation and find a very strong dependence on PEG molecular weight. At low PEG molecular weight, decondensation occurs at relatively low concentrations of PEG, and over a wide range of salt concentrations. This suggests that in the reentrant decondensation the flexible polymers used are not completely excluded from the condensed phase.
通过聚合度在45至182之间的聚乙二醇(PEG)和单价盐(NaCl)诱导约4kbp的DNA片段发生ψ凝聚。利用圆二色光谱,我们能够准确确定诱导凝聚所需的PEG临界量,它是NaCl浓度的函数。发现其对PEG聚合度有显著依赖性。多分子凝聚确定的相边界与之前单分子折叠观察到的非常相似,在低盐和高盐浓度下有两种渐近状态。我们使用一个理论模型分析数据,该模型恰当地考虑了DNA的聚电解质性质和凝聚相的液晶性。该模型假设所有PEG都被排除在凝聚物之外,并且仅在低盐时显示再入去凝聚。我们还系统地研究了再入去凝聚,发现其对PEG分子量有很强的依赖性。在低PEG分子量时,去凝聚发生在相对较低的PEG浓度下,并且在很宽的盐浓度范围内。这表明在再入去凝聚中,所使用的柔性聚合物并未完全被排除在凝聚相之外。