• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

马拉齐,一种在玉米尾孢菌中存在的退化的、物种特异性转座元件。

Malazy, a degenerate, species-specific transposable element in Cercospora zeae-maydis.

作者信息

Shim Won-Bo, Dunkle Larry D

机构信息

Department of Plant Pathology and Microbiology, The Program for the Biology of Filamentous Fungi, Texas A&M University, College Station, Texas 77843-2132, USA.

出版信息

Mycologia. 2005 Mar-Apr;97(2):349-55. doi: 10.3852/mycologia.97.2.349.

DOI:10.3852/mycologia.97.2.349
PMID:16396343
Abstract

Two fungal pathogens, Cercospora zeae-maydis Groups I and II, cause gray leaf spot of maize. During the sequencing of a cosmid library from C. zeae-maydis Group I, we discovered a sequence with high similarity to Maggy, a transposable element from Magnaporthe grisea. The element from C. zeae-maydis, named Malazy, contained 194-base-pair terminal repeats and sequences with high similarity to reverse transcriptase and integrase, components of the POL gene in the gypsy-like retrotransposons in fungi. Sequences with similarity to other POL gene components, protease and ribonuclease, were not detected in Malazy. A single copy of the element was detected by PCR and Southern analyses in all six North American isolates of C. zeae-maydis Group I but was not detected in the four isolates of C. zeae-maydis Group II from three continents or in phylogenetically related species. Fragments of the core domains of reverse transcriptase and integrase contained a high frequency of stop codons that were conserved in all six isolates of Group I. Additional C:G to T:A transitions in occasional isolates usually were silent mutations, while two resulted in isolate-specific stop codons. The absence of Malazy from related species suggests that it was acquired after the divergence of C. zeae-maydis Groups I and II. The high frequency of stop codons and the presence of a single copy of the element suggest that it was inactivated soon after it was acquired. Because the element is inactive and because reading frames for other genes were not found in sequences flanking the element, Malazy does not appear to be the cause of differences leading to speciation or genetic diversity between C. zeae-maydis Groups I and II.

摘要

两种真菌病原体,玉米尾孢菌I组和II组,可引发玉米灰斑病。在对玉米尾孢菌I组的黏粒文库进行测序时,我们发现了一段与稻瘟病菌的转座元件Maggy高度相似的序列。来自玉米尾孢菌的该元件名为Malazy,含有194个碱基对的末端重复序列,以及与逆转录酶和整合酶高度相似的序列,这两种酶是真菌中类gypsy逆转座子POL基因的组成部分。在Malazy中未检测到与其他POL基因组成部分(蛋白酶和核糖核酸酶)相似的序列。通过PCR和Southern分析在所有6株北美玉米尾孢菌I组分离株中检测到该元件的单拷贝,但在来自三大洲的4株玉米尾孢菌II组分离株或系统发育相关物种中未检测到。逆转录酶和整合酶核心结构域的片段含有高频终止密码子,这些密码子在I组的所有6株分离株中都是保守的。偶尔分离株中额外的C:G到T:A转换通常是沉默突变,而有两个导致了分离株特异性的终止密码子。相关物种中不存在Malazy,这表明它是在玉米尾孢菌I组和II组分化之后获得的。终止密码子的高频出现以及该元件单拷贝的存在表明它在获得后不久就失活了。由于该元件是无活性的,并且在该元件侧翼序列中未发现其他基因的阅读框,因此Malazy似乎不是导致玉米尾孢菌I组和II组之间物种形成或遗传多样性差异的原因。

相似文献

1
Malazy, a degenerate, species-specific transposable element in Cercospora zeae-maydis.马拉齐,一种在玉米尾孢菌中存在的退化的、物种特异性转座元件。
Mycologia. 2005 Mar-Apr;97(2):349-55. doi: 10.3852/mycologia.97.2.349.
2
Grasshopper, a long terminal repeat (LTR) retroelement in the phytopathogenic fungus Magnaporthe grisea.蚱蜢,一种存在于植物病原真菌稻瘟病菌中的长末端重复序列(LTR)反转录转座子。
Mol Plant Microbe Interact. 1993 Jan-Feb;6(1):114-26. doi: 10.1094/mpmi-6-114.
3
Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth.对玉米叶部病原菌玉米尾孢菌表达序列标签的分析鉴定出了在营养生长、侵染生长和生殖生长过程中表达的新基因。
BMC Genomics. 2008 Nov 4;9:523. doi: 10.1186/1471-2164-9-523.
4
pCal, a highly unusual Ty1/copia retrotransposon from the pathogenic yeast Candida albicans.pCal,一种来自致病性白色念珠菌的非常特殊的Ty1/copia逆转座子。
J Bacteriol. 1997 Nov;179(22):7118-28. doi: 10.1128/jb.179.22.7118-7128.1997.
5
Pathogenicity Variation in Two Genomes of Species Causing Gray Leaf Spot in Maize.引起玉米灰斑病的 种两个基因组的致病性变异。
Mol Plant Microbe Interact. 2023 Jan;36(1):14-25. doi: 10.1094/MPMI-06-22-0138-R. Epub 2023 Jan 10.
6
Complementation of CTB7 in the Maize Pathogen Cercospora zeina Overcomes the Lack of In Vitro Cercosporin Production.CTB7 在玉米病原菌大丽轮枝菌中的互补克服了体外轮枝菌素产生的缺乏。
Mol Plant Microbe Interact. 2017 Sep;30(9):710-724. doi: 10.1094/MPMI-03-17-0054-R. Epub 2017 Jul 7.
7
MAGGY, a retrotransposon in the genome of the rice blast fungus Magnaporthe grisea.MAGGY,稻瘟病菌Magnaporthe grisea基因组中的一个反转录转座子。
Mol Gen Genet. 1996 Jul 26;251(6):665-74. doi: 10.1007/BF02174115.
8
DAB1: a degenerate retrotransposon-like element from Neurospora crassa.DAB1:一种来自粗糙脉孢菌的类似简并反转录转座子的元件。
Mol Gen Genet. 1998 May;258(4):431-6. doi: 10.1007/s004380050752.
9
Structure and evolution of Cyclops: a novel giant retrotransposon of the Ty3/Gypsy family highly amplified in pea and other legume species.独眼巨人的结构与进化:一种在豌豆和其他豆科植物中高度扩增的Ty3/Gypsy家族新型巨型逆转座子。
Plant Mol Biol. 1998 May;37(2):363-75. doi: 10.1023/a:1005969626142.
10
Genetic Relatedness of African and United States Populations of Cercospora zeae-maydis.玉米尾孢菌中非裔和美国人群体的遗传关联性。
Phytopathology. 2000 May;90(5):486-90. doi: 10.1094/PHYTO.2000.90.5.486.

引用本文的文献

1
Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.在哺乳动物中保存的不同重复家族群与脊椎动物不同时期的调控创新相对应。
Biol Direct. 2012 Oct 25;7:36. doi: 10.1186/1745-6150-7-36.
2
Families of transposable elements, population structure and the origin of species.转座元件的家族、种群结构和物种起源。
Biol Direct. 2011 Sep 19;6:44. doi: 10.1186/1745-6150-6-44.
3
Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth.
对玉米叶部病原菌玉米尾孢菌表达序列标签的分析鉴定出了在营养生长、侵染生长和生殖生长过程中表达的新基因。
BMC Genomics. 2008 Nov 4;9:523. doi: 10.1186/1471-2164-9-523.